Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC18.85■□□□□ 0.61
Nkx6-1Q99MA9 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC18.85■□□□□ 0.61
Nkx6-1Q99MA9 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nkx6-1Q99MA9 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nkx6-1Q99MA9 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nkx6-1Q99MA9 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nkx6-1Q99MA9 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nkx6-1Q99MA9 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC18.84■□□□□ 0.61
Nkx6-1Q99MA9 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nkx6-1Q99MA9 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nkx6-1Q99MA9 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nkx6-1Q99MA9 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Nkx6-1Q99MA9 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nkx6-1Q99MA9 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nkx6-1Q99MA9 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Nkx6-1Q99MA9 Reep4-203ENSMUST00000226563 1444 ntBASIC18.83■□□□□ 0.61
Nkx6-1Q99MA9 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Nkx6-1Q99MA9 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Nkx6-1Q99MA9 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Nkx6-1Q99MA9 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC18.83■□□□□ 0.6
Nkx6-1Q99MA9 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC18.83■□□□□ 0.6
Nkx6-1Q99MA9 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
Nkx6-1Q99MA9 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nkx6-1Q99MA9 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nkx6-1Q99MA9 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC18.82■□□□□ 0.6
Nkx6-1Q99MA9 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Nkx6-1Q99MA9 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Nkx6-1Q99MA9 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC18.82■□□□□ 0.6
Nkx6-1Q99MA9 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nkx6-1Q99MA9 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nkx6-1Q99MA9 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nkx6-1Q99MA9 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nkx6-1Q99MA9 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nkx6-1Q99MA9 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nkx6-1Q99MA9 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Nkx6-1Q99MA9 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nkx6-1Q99MA9 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Nkx6-1Q99MA9 Gm12441-201ENSMUST00000121806 588 ntBASIC18.81■□□□□ 0.6
Nkx6-1Q99MA9 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nkx6-1Q99MA9 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Nkx6-1Q99MA9 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC18.81■□□□□ 0.6
Nkx6-1Q99MA9 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Nkx6-1Q99MA9 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nkx6-1Q99MA9 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nkx6-1Q99MA9 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nkx6-1Q99MA9 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC18.8■□□□□ 0.6
Nkx6-1Q99MA9 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nkx6-1Q99MA9 Gm10653-202ENSMUST00000139570 835 ntBASIC18.8■□□□□ 0.6
Nkx6-1Q99MA9 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nkx6-1Q99MA9 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nkx6-1Q99MA9 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nkx6-1Q99MA9 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nkx6-1Q99MA9 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nkx6-1Q99MA9 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Nkx6-1Q99MA9 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nkx6-1Q99MA9 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nkx6-1Q99MA9 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nkx6-1Q99MA9 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nkx6-1Q99MA9 Gm7514-201ENSMUST00000209475 934 ntBASIC18.79■□□□□ 0.6
Nkx6-1Q99MA9 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Nkx6-1Q99MA9 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Nkx6-1Q99MA9 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nkx6-1Q99MA9 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nkx6-1Q99MA9 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
Nkx6-1Q99MA9 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nkx6-1Q99MA9 Gm14281-201ENSMUST00000121700 1294 ntBASIC18.78■□□□□ 0.6
Nkx6-1Q99MA9 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nkx6-1Q99MA9 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nkx6-1Q99MA9 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nkx6-1Q99MA9 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nkx6-1Q99MA9 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nkx6-1Q99MA9 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Nkx6-1Q99MA9 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nkx6-1Q99MA9 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC18.77■□□□□ 0.6
Nkx6-1Q99MA9 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nkx6-1Q99MA9 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nkx6-1Q99MA9 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Nkx6-1Q99MA9 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nkx6-1Q99MA9 AC164883.3-201ENSMUST00000227396 1774 ntBASIC18.76■□□□□ 0.59
Nkx6-1Q99MA9 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nkx6-1Q99MA9 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nkx6-1Q99MA9 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC18.76■□□□□ 0.59
Nkx6-1Q99MA9 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC18.76■□□□□ 0.59
Nkx6-1Q99MA9 Ap3s1-204ENSMUST00000225520 957 ntBASIC18.76■□□□□ 0.59
Nkx6-1Q99MA9 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Nkx6-1Q99MA9 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nkx6-1Q99MA9 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Nkx6-1Q99MA9 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC18.75■□□□□ 0.59
Nkx6-1Q99MA9 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Nkx6-1Q99MA9 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nkx6-1Q99MA9 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
Nkx6-1Q99MA9 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC18.75■□□□□ 0.59
Nkx6-1Q99MA9 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Nkx6-1Q99MA9 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nkx6-1Q99MA9 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC18.75■□□□□ 0.59
Nkx6-1Q99MA9 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC18.75■□□□□ 0.59
Nkx6-1Q99MA9 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nkx6-1Q99MA9 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nkx6-1Q99MA9 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC18.74■□□□□ 0.59
Nkx6-1Q99MA9 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms