Protein–RNA interactions for Protein: Q99KL7

Rab28, Ras-related protein Rab-28, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab28Q99KL7 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Rab28Q99KL7 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rab28Q99KL7 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Rab28Q99KL7 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Rab28Q99KL7 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rab28Q99KL7 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rab28Q99KL7 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Rab28Q99KL7 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rab28Q99KL7 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rab28Q99KL7 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Rab28Q99KL7 Gm45417-201ENSMUST00000209533 758 ntBASIC19.38■□□□□ 0.69
Rab28Q99KL7 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rab28Q99KL7 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rab28Q99KL7 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Rab28Q99KL7 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Rab28Q99KL7 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rab28Q99KL7 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.37■□□□□ 0.69
Rab28Q99KL7 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rab28Q99KL7 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rab28Q99KL7 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Rab28Q99KL7 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.37■□□□□ 0.69
Rab28Q99KL7 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Rab28Q99KL7 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Rab28Q99KL7 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rab28Q99KL7 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rab28Q99KL7 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rab28Q99KL7 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Rab28Q99KL7 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Rab28Q99KL7 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Rab28Q99KL7 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rab28Q99KL7 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Rab28Q99KL7 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rab28Q99KL7 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC19.36■□□□□ 0.69
Rab28Q99KL7 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rab28Q99KL7 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rab28Q99KL7 Gm38160-201ENSMUST00000193090 2499 ntBASIC19.36■□□□□ 0.69
Rab28Q99KL7 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rab28Q99KL7 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Rab28Q99KL7 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rab28Q99KL7 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rab28Q99KL7 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Rab28Q99KL7 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Rab28Q99KL7 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Rab28Q99KL7 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rab28Q99KL7 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rab28Q99KL7 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rab28Q99KL7 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC19.34■□□□□ 0.69
Rab28Q99KL7 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.34■□□□□ 0.69
Rab28Q99KL7 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rab28Q99KL7 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Rab28Q99KL7 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Rab28Q99KL7 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rab28Q99KL7 Gm6085-201ENSMUST00000182774 1470 ntBASIC19.34■□□□□ 0.69
Rab28Q99KL7 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rab28Q99KL7 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Rab28Q99KL7 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rab28Q99KL7 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Rab28Q99KL7 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rab28Q99KL7 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.33■□□□□ 0.69
Rab28Q99KL7 Gm10209-201ENSMUST00000203397 1607 ntBASIC19.33■□□□□ 0.69
Rab28Q99KL7 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rab28Q99KL7 Gm37035-201ENSMUST00000194809 2148 ntBASIC19.33■□□□□ 0.69
Rab28Q99KL7 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rab28Q99KL7 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
Rab28Q99KL7 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Rab28Q99KL7 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC19.33■□□□□ 0.68
Rab28Q99KL7 Mir7075-201ENSMUST00000184187 82 ntBASIC19.33■□□□□ 0.68
Rab28Q99KL7 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rab28Q99KL7 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rab28Q99KL7 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Rab28Q99KL7 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rab28Q99KL7 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rab28Q99KL7 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rab28Q99KL7 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Rab28Q99KL7 Gm7160-202ENSMUST00000188519 1027 ntBASIC19.32■□□□□ 0.68
Rab28Q99KL7 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC19.32■□□□□ 0.68
Rab28Q99KL7 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Rab28Q99KL7 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Rab28Q99KL7 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rab28Q99KL7 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
Rab28Q99KL7 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rab28Q99KL7 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rab28Q99KL7 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rab28Q99KL7 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC19.31■□□□□ 0.68
Rab28Q99KL7 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Rab28Q99KL7 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rab28Q99KL7 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rab28Q99KL7 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Rab28Q99KL7 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rab28Q99KL7 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
Rab28Q99KL7 Spcs1-204ENSMUST00000226782 949 ntBASIC19.31■□□□□ 0.68
Rab28Q99KL7 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rab28Q99KL7 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Rab28Q99KL7 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
Rab28Q99KL7 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rab28Q99KL7 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Rab28Q99KL7 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
Rab28Q99KL7 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rab28Q99KL7 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Rab28Q99KL7 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms