Protein–RNA interactions for Protein: Q91Y19

Pcdha11, Protocadherin alpha 11, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha11Q91Y19 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdha11Q91Y19 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdha11Q91Y19 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdha11Q91Y19 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdha11Q91Y19 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdha11Q91Y19 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdha11Q91Y19 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC21.05■□□□□ 0.96
Pcdha11Q91Y19 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdha11Q91Y19 Gm27045-201ENSMUST00000182145 1402 ntBASIC21.05■□□□□ 0.96
Pcdha11Q91Y19 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdha11Q91Y19 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdha11Q91Y19 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdha11Q91Y19 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC21.05■□□□□ 0.96
Pcdha11Q91Y19 Gm7160-202ENSMUST00000188519 1027 ntBASIC21.05■□□□□ 0.96
Pcdha11Q91Y19 Gm8493-201ENSMUST00000196881 489 ntBASIC21.05■□□□□ 0.96
Pcdha11Q91Y19 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Pcdha11Q91Y19 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC21.05■□□□□ 0.96
Pcdha11Q91Y19 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdha11Q91Y19 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Pcdha11Q91Y19 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Pcdha11Q91Y19 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdha11Q91Y19 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdha11Q91Y19 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdha11Q91Y19 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC21.04■□□□□ 0.96
Pcdha11Q91Y19 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdha11Q91Y19 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdha11Q91Y19 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdha11Q91Y19 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Pcdha11Q91Y19 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdha11Q91Y19 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC21.04■□□□□ 0.96
Pcdha11Q91Y19 Gm10209-201ENSMUST00000203397 1607 ntBASIC21.04■□□□□ 0.96
Pcdha11Q91Y19 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdha11Q91Y19 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdha11Q91Y19 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdha11Q91Y19 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC21.03■□□□□ 0.96
Pcdha11Q91Y19 Gm12251-201ENSMUST00000117893 792 ntBASIC21.03■□□□□ 0.96
Pcdha11Q91Y19 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdha11Q91Y19 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdha11Q91Y19 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Pcdha11Q91Y19 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdha11Q91Y19 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC21.02■□□□□ 0.96
Pcdha11Q91Y19 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC21.02■□□□□ 0.96
Pcdha11Q91Y19 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdha11Q91Y19 Spcs1-204ENSMUST00000226782 949 ntBASIC21.02■□□□□ 0.96
Pcdha11Q91Y19 Wdr70-203ENSMUST00000227371 1130 ntBASIC21.02■□□□□ 0.96
Pcdha11Q91Y19 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdha11Q91Y19 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdha11Q91Y19 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Pcdha11Q91Y19 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Pcdha11Q91Y19 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdha11Q91Y19 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
Pcdha11Q91Y19 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdha11Q91Y19 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
Pcdha11Q91Y19 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdha11Q91Y19 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdha11Q91Y19 Gm6085-201ENSMUST00000182774 1470 ntBASIC21.01■□□□□ 0.95
Pcdha11Q91Y19 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdha11Q91Y19 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdha11Q91Y19 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC21■□□□□ 0.95
Pcdha11Q91Y19 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdha11Q91Y19 Serp2-204ENSMUST00000228055 705 ntBASIC21■□□□□ 0.95
Pcdha11Q91Y19 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdha11Q91Y19 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC21■□□□□ 0.95
Pcdha11Q91Y19 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdha11Q91Y19 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdha11Q91Y19 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdha11Q91Y19 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC20.99■□□□□ 0.95
Pcdha11Q91Y19 Gm43017-201ENSMUST00000198296 752 ntBASIC20.99■□□□□ 0.95
Pcdha11Q91Y19 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdha11Q91Y19 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdha11Q91Y19 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdha11Q91Y19 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Pcdha11Q91Y19 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdha11Q91Y19 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Pcdha11Q91Y19 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC20.99■□□□□ 0.95
Pcdha11Q91Y19 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdha11Q91Y19 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdha11Q91Y19 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdha11Q91Y19 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Pcdha11Q91Y19 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdha11Q91Y19 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdha11Q91Y19 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdha11Q91Y19 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC20.98■□□□□ 0.95
Pcdha11Q91Y19 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdha11Q91Y19 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdha11Q91Y19 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC20.98■□□□□ 0.95
Pcdha11Q91Y19 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdha11Q91Y19 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdha11Q91Y19 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Pcdha11Q91Y19 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
Pcdha11Q91Y19 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdha11Q91Y19 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdha11Q91Y19 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdha11Q91Y19 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC20.97■□□□□ 0.95
Pcdha11Q91Y19 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdha11Q91Y19 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdha11Q91Y19 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdha11Q91Y19 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdha11Q91Y19 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdha11Q91Y19 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms