Protein–RNA interactions for Protein: Q91Y15

Pcdha5, Protocadherin alpha 5, mousemouse

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha5Q91Y15 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdha5Q91Y15 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdha5Q91Y15 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdha5Q91Y15 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdha5Q91Y15 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Pcdha5Q91Y15 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdha5Q91Y15 Gm42501-201ENSMUST00000200220 1026 ntBASIC20.6■□□□□ 0.89
Pcdha5Q91Y15 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdha5Q91Y15 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdha5Q91Y15 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdha5Q91Y15 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdha5Q91Y15 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC20.6■□□□□ 0.89
Pcdha5Q91Y15 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdha5Q91Y15 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Pcdha5Q91Y15 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdha5Q91Y15 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdha5Q91Y15 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdha5Q91Y15 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdha5Q91Y15 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Pcdha5Q91Y15 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdha5Q91Y15 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdha5Q91Y15 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC20.59■□□□□ 0.89
Pcdha5Q91Y15 Gm10399-202ENSMUST00000202768 748 ntBASIC20.59■□□□□ 0.89
Pcdha5Q91Y15 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.59■□□□□ 0.89
Pcdha5Q91Y15 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdha5Q91Y15 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdha5Q91Y15 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC20.58■□□□□ 0.89
Pcdha5Q91Y15 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC20.58■□□□□ 0.89
Pcdha5Q91Y15 AC093043.1-201ENSMUST00000226700 898 ntBASIC20.58■□□□□ 0.89
Pcdha5Q91Y15 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdha5Q91Y15 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdha5Q91Y15 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Pcdha5Q91Y15 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Pcdha5Q91Y15 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
Pcdha5Q91Y15 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Pcdha5Q91Y15 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Pcdha5Q91Y15 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Pcdha5Q91Y15 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
Pcdha5Q91Y15 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Pcdha5Q91Y15 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdha5Q91Y15 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdha5Q91Y15 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdha5Q91Y15 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Pcdha5Q91Y15 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdha5Q91Y15 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdha5Q91Y15 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdha5Q91Y15 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdha5Q91Y15 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdha5Q91Y15 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Pcdha5Q91Y15 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdha5Q91Y15 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdha5Q91Y15 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Pcdha5Q91Y15 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdha5Q91Y15 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Pcdha5Q91Y15 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdha5Q91Y15 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdha5Q91Y15 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Pcdha5Q91Y15 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC20.56■□□□□ 0.88
Pcdha5Q91Y15 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdha5Q91Y15 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdha5Q91Y15 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20.56■□□□□ 0.88
Pcdha5Q91Y15 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdha5Q91Y15 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdha5Q91Y15 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC20.55■□□□□ 0.88
Pcdha5Q91Y15 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdha5Q91Y15 Rps24-207ENSMUST00000224568 714 ntBASIC20.55■□□□□ 0.88
Pcdha5Q91Y15 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdha5Q91Y15 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdha5Q91Y15 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdha5Q91Y15 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdha5Q91Y15 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdha5Q91Y15 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdha5Q91Y15 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdha5Q91Y15 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Pcdha5Q91Y15 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdha5Q91Y15 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdha5Q91Y15 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.54■□□□□ 0.88
Pcdha5Q91Y15 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdha5Q91Y15 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdha5Q91Y15 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdha5Q91Y15 Gm5131-201ENSMUST00000212776 1238 ntBASIC20.54■□□□□ 0.88
Pcdha5Q91Y15 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdha5Q91Y15 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdha5Q91Y15 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdha5Q91Y15 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdha5Q91Y15 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdha5Q91Y15 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdha5Q91Y15 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdha5Q91Y15 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdha5Q91Y15 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Pcdha5Q91Y15 Gm40881-201ENSMUST00000223397 166 ntBASIC20.53■□□□□ 0.88
Pcdha5Q91Y15 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdha5Q91Y15 Gm5913-201ENSMUST00000119397 1399 ntBASIC20.53■□□□□ 0.88
Pcdha5Q91Y15 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdha5Q91Y15 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdha5Q91Y15 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC20.53■□□□□ 0.88
Pcdha5Q91Y15 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdha5Q91Y15 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdha5Q91Y15 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdha5Q91Y15 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms