Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
Pcdhga11Q91XY8 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhga11Q91XY8 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhga11Q91XY8 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhga11Q91XY8 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhga11Q91XY8 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhga11Q91XY8 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhga11Q91XY8 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC19.24■□□□□ 0.67
Pcdhga11Q91XY8 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC19.24■□□□□ 0.67
Pcdhga11Q91XY8 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC19.24■□□□□ 0.67
Pcdhga11Q91XY8 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
Pcdhga11Q91XY8 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.24■□□□□ 0.67
Pcdhga11Q91XY8 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhga11Q91XY8 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhga11Q91XY8 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhga11Q91XY8 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhga11Q91XY8 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhga11Q91XY8 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhga11Q91XY8 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhga11Q91XY8 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhga11Q91XY8 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhga11Q91XY8 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC19.23■□□□□ 0.67
Pcdhga11Q91XY8 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC19.23■□□□□ 0.67
Pcdhga11Q91XY8 Golph3-202ENSMUST00000226517 2359 ntBASIC19.23■□□□□ 0.67
Pcdhga11Q91XY8 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhga11Q91XY8 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhga11Q91XY8 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhga11Q91XY8 AC166356.1-201ENSMUST00000228236 1426 ntBASIC19.23■□□□□ 0.67
Pcdhga11Q91XY8 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Pcdhga11Q91XY8 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.23■□□□□ 0.67
Pcdhga11Q91XY8 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhga11Q91XY8 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhga11Q91XY8 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhga11Q91XY8 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhga11Q91XY8 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhga11Q91XY8 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhga11Q91XY8 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhga11Q91XY8 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhga11Q91XY8 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhga11Q91XY8 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhga11Q91XY8 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC19.21■□□□□ 0.67
Pcdhga11Q91XY8 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC19.21■□□□□ 0.67
Pcdhga11Q91XY8 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhga11Q91XY8 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhga11Q91XY8 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhga11Q91XY8 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Pcdhga11Q91XY8 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.66
Pcdhga11Q91XY8 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhga11Q91XY8 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhga11Q91XY8 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhga11Q91XY8 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhga11Q91XY8 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhga11Q91XY8 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Pcdhga11Q91XY8 Gm7417-201ENSMUST00000192950 473 ntBASIC19.2■□□□□ 0.66
Pcdhga11Q91XY8 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhga11Q91XY8 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhga11Q91XY8 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhga11Q91XY8 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhga11Q91XY8 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhga11Q91XY8 Gm37035-201ENSMUST00000194809 2148 ntBASIC19.19■□□□□ 0.66
Pcdhga11Q91XY8 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhga11Q91XY8 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhga11Q91XY8 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhga11Q91XY8 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhga11Q91XY8 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhga11Q91XY8 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhga11Q91XY8 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhga11Q91XY8 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhga11Q91XY8 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhga11Q91XY8 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhga11Q91XY8 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhga11Q91XY8 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhga11Q91XY8 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhga11Q91XY8 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC19.18■□□□□ 0.66
Pcdhga11Q91XY8 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC19.18■□□□□ 0.66
Pcdhga11Q91XY8 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC19.17■□□□□ 0.66
Pcdhga11Q91XY8 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhga11Q91XY8 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Pcdhga11Q91XY8 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC19.17■□□□□ 0.66
Pcdhga11Q91XY8 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhga11Q91XY8 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhga11Q91XY8 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhga11Q91XY8 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhga11Q91XY8 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhga11Q91XY8 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhga11Q91XY8 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhga11Q91XY8 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhga11Q91XY8 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhga11Q91XY8 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhga11Q91XY8 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhga11Q91XY8 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhga11Q91XY8 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhga11Q91XY8 Gm9870-201ENSMUST00000063874 645 ntBASIC19.16■□□□□ 0.66
Pcdhga11Q91XY8 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhga11Q91XY8 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhga11Q91XY8 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhga11Q91XY8 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhga11Q91XY8 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Pcdhga11Q91XY8 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC19.15■□□□□ 0.66
Pcdhga11Q91XY8 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms