Protein–RNA interactions for Protein: Q91XX6

Pcdhgb4, Protocadherin gamma B4, mousemouse

Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb4Q91XX6 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdhgb4Q91XX6 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC21.19■□□□□ 0.98
Pcdhgb4Q91XX6 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdhgb4Q91XX6 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdhgb4Q91XX6 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdhgb4Q91XX6 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdhgb4Q91XX6 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdhgb4Q91XX6 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdhgb4Q91XX6 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdhgb4Q91XX6 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdhgb4Q91XX6 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdhgb4Q91XX6 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdhgb4Q91XX6 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC21.18■□□□□ 0.98
Pcdhgb4Q91XX6 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdhgb4Q91XX6 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
Pcdhgb4Q91XX6 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC21.18■□□□□ 0.98
Pcdhgb4Q91XX6 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdhgb4Q91XX6 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC21.18■□□□□ 0.98
Pcdhgb4Q91XX6 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdhgb4Q91XX6 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdhgb4Q91XX6 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Pcdhgb4Q91XX6 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdhgb4Q91XX6 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdhgb4Q91XX6 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC21.17■□□□□ 0.98
Pcdhgb4Q91XX6 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdhgb4Q91XX6 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdhgb4Q91XX6 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdhgb4Q91XX6 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdhgb4Q91XX6 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdhgb4Q91XX6 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdhgb4Q91XX6 Golph3-202ENSMUST00000226517 2359 ntBASIC21.17■□□□□ 0.98
Pcdhgb4Q91XX6 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdhgb4Q91XX6 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Pcdhgb4Q91XX6 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhgb4Q91XX6 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhgb4Q91XX6 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhgb4Q91XX6 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhgb4Q91XX6 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhgb4Q91XX6 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhgb4Q91XX6 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhgb4Q91XX6 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhgb4Q91XX6 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC21.16■□□□□ 0.98
Pcdhgb4Q91XX6 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Pcdhgb4Q91XX6 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Pcdhgb4Q91XX6 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC21.16■□□□□ 0.98
Pcdhgb4Q91XX6 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhgb4Q91XX6 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdhgb4Q91XX6 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdhgb4Q91XX6 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC21.15■□□□□ 0.98
Pcdhgb4Q91XX6 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC21.15■□□□□ 0.98
Pcdhgb4Q91XX6 Gm14117-201ENSMUST00000122417 843 ntBASIC21.15■□□□□ 0.98
Pcdhgb4Q91XX6 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC21.15■□□□□ 0.98
Pcdhgb4Q91XX6 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdhgb4Q91XX6 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Pcdhgb4Q91XX6 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Pcdhgb4Q91XX6 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdhgb4Q91XX6 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdhgb4Q91XX6 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdhgb4Q91XX6 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC21.15■□□□□ 0.98
Pcdhgb4Q91XX6 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Pcdhgb4Q91XX6 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC21.14■□□□□ 0.98
Pcdhgb4Q91XX6 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Pcdhgb4Q91XX6 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdhgb4Q91XX6 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Pcdhgb4Q91XX6 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC21.14■□□□□ 0.97
Pcdhgb4Q91XX6 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdhgb4Q91XX6 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC21.14■□□□□ 0.97
Pcdhgb4Q91XX6 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdhgb4Q91XX6 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdhgb4Q91XX6 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdhgb4Q91XX6 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
Pcdhgb4Q91XX6 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Pcdhgb4Q91XX6 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdhgb4Q91XX6 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdhgb4Q91XX6 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC21.14■□□□□ 0.97
Pcdhgb4Q91XX6 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdhgb4Q91XX6 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdhgb4Q91XX6 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdhgb4Q91XX6 Gm22238-201ENSMUST00000175222 88 ntBASIC21.13■□□□□ 0.97
Pcdhgb4Q91XX6 Gm10657-201ENSMUST00000193528 1031 ntBASIC21.13■□□□□ 0.97
Pcdhgb4Q91XX6 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdhgb4Q91XX6 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Pcdhgb4Q91XX6 AC166356.1-201ENSMUST00000228236 1426 ntBASIC21.12■□□□□ 0.97
Pcdhgb4Q91XX6 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdhgb4Q91XX6 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC21.12■□□□□ 0.97
Pcdhgb4Q91XX6 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdhgb4Q91XX6 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdhgb4Q91XX6 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdhgb4Q91XX6 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Pcdhgb4Q91XX6 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Pcdhgb4Q91XX6 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC21.12■□□□□ 0.97
Pcdhgb4Q91XX6 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdhgb4Q91XX6 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdhgb4Q91XX6 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC21.11■□□□□ 0.97
Pcdhgb4Q91XX6 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdhgb4Q91XX6 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdhgb4Q91XX6 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC21.11■□□□□ 0.97
Pcdhgb4Q91XX6 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdhgb4Q91XX6 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdhgb4Q91XX6 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms