Protein–RNA interactions for Protein: Q91XX1

Pcdhgc3, Protocadherin gamma C3, mousemouse

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc3Q91XX1 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhgc3Q91XX1 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhgc3Q91XX1 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC18.85■□□□□ 0.61
Pcdhgc3Q91XX1 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC18.85■□□□□ 0.61
Pcdhgc3Q91XX1 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhgc3Q91XX1 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhgc3Q91XX1 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhgc3Q91XX1 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhgc3Q91XX1 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhgc3Q91XX1 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhgc3Q91XX1 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhgc3Q91XX1 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhgc3Q91XX1 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhgc3Q91XX1 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhgc3Q91XX1 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhgc3Q91XX1 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhgc3Q91XX1 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhgc3Q91XX1 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Pcdhgc3Q91XX1 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhgc3Q91XX1 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhgc3Q91XX1 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhgc3Q91XX1 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhgc3Q91XX1 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC18.83■□□□□ 0.61
Pcdhgc3Q91XX1 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC18.83■□□□□ 0.6
Pcdhgc3Q91XX1 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdhgc3Q91XX1 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdhgc3Q91XX1 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdhgc3Q91XX1 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdhgc3Q91XX1 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdhgc3Q91XX1 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Pcdhgc3Q91XX1 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdhgc3Q91XX1 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Pcdhgc3Q91XX1 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhgc3Q91XX1 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC18.82■□□□□ 0.6
Pcdhgc3Q91XX1 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC18.82■□□□□ 0.6
Pcdhgc3Q91XX1 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhgc3Q91XX1 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhgc3Q91XX1 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
Pcdhgc3Q91XX1 Golph3-205ENSMUST00000228671 2842 ntBASIC18.82■□□□□ 0.6
Pcdhgc3Q91XX1 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhgc3Q91XX1 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Pcdhgc3Q91XX1 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhgc3Q91XX1 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhgc3Q91XX1 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhgc3Q91XX1 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhgc3Q91XX1 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhgc3Q91XX1 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhgc3Q91XX1 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Pcdhgc3Q91XX1 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC18.8■□□□□ 0.6
Pcdhgc3Q91XX1 Gm10420-201ENSMUST00000121713 882 ntBASIC18.8■□□□□ 0.6
Pcdhgc3Q91XX1 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhgc3Q91XX1 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhgc3Q91XX1 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhgc3Q91XX1 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhgc3Q91XX1 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhgc3Q91XX1 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
Pcdhgc3Q91XX1 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhgc3Q91XX1 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhgc3Q91XX1 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhgc3Q91XX1 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhgc3Q91XX1 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhgc3Q91XX1 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhgc3Q91XX1 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Pcdhgc3Q91XX1 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Pcdhgc3Q91XX1 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhgc3Q91XX1 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhgc3Q91XX1 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhgc3Q91XX1 Cap2-205ENSMUST00000225824 1634 ntBASIC18.78■□□□□ 0.6
Pcdhgc3Q91XX1 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhgc3Q91XX1 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhgc3Q91XX1 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhgc3Q91XX1 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhgc3Q91XX1 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC18.78■□□□□ 0.6
Pcdhgc3Q91XX1 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhgc3Q91XX1 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhgc3Q91XX1 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhgc3Q91XX1 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhgc3Q91XX1 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhgc3Q91XX1 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
Pcdhgc3Q91XX1 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhgc3Q91XX1 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhgc3Q91XX1 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhgc3Q91XX1 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhgc3Q91XX1 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Pcdhgc3Q91XX1 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
Pcdhgc3Q91XX1 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhgc3Q91XX1 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Pcdhgc3Q91XX1 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhgc3Q91XX1 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC18.76■□□□□ 0.59
Pcdhgc3Q91XX1 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
Pcdhgc3Q91XX1 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.76■□□□□ 0.59
Pcdhgc3Q91XX1 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC18.76■□□□□ 0.59
Pcdhgc3Q91XX1 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhgc3Q91XX1 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhgc3Q91XX1 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC18.76■□□□□ 0.59
Pcdhgc3Q91XX1 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhgc3Q91XX1 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhgc3Q91XX1 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Pcdhgc3Q91XX1 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhgc3Q91XX1 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms