Protein–RNA interactions for Protein: Q91W78

Usb1, U6 snRNA phosphodiesterase, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usb1Q91W78 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Usb1Q91W78 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Usb1Q91W78 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
Usb1Q91W78 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Usb1Q91W78 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Usb1Q91W78 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Usb1Q91W78 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Usb1Q91W78 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Usb1Q91W78 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Usb1Q91W78 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Usb1Q91W78 AC140930.3-201ENSMUST00000222935 274 ntBASIC19.72■□□□□ 0.75
Usb1Q91W78 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Usb1Q91W78 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Usb1Q91W78 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Usb1Q91W78 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Usb1Q91W78 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Usb1Q91W78 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Usb1Q91W78 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19.71■□□□□ 0.75
Usb1Q91W78 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Usb1Q91W78 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Usb1Q91W78 Gm12821-201ENSMUST00000120022 600 ntBASIC19.71■□□□□ 0.75
Usb1Q91W78 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
Usb1Q91W78 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Usb1Q91W78 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Usb1Q91W78 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.71■□□□□ 0.75
Usb1Q91W78 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC19.71■□□□□ 0.75
Usb1Q91W78 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.7■□□□□ 0.74
Usb1Q91W78 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Usb1Q91W78 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Usb1Q91W78 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC19.7■□□□□ 0.74
Usb1Q91W78 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Usb1Q91W78 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Usb1Q91W78 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Usb1Q91W78 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Usb1Q91W78 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Usb1Q91W78 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Usb1Q91W78 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Usb1Q91W78 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Usb1Q91W78 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Usb1Q91W78 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Usb1Q91W78 Appbp2os-202ENSMUST00000206972 447 ntBASIC19.69■□□□□ 0.74
Usb1Q91W78 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Usb1Q91W78 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Usb1Q91W78 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.69■□□□□ 0.74
Usb1Q91W78 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC19.69■□□□□ 0.74
Usb1Q91W78 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Usb1Q91W78 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC19.69■□□□□ 0.74
Usb1Q91W78 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Usb1Q91W78 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Usb1Q91W78 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.68■□□□□ 0.74
Usb1Q91W78 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Usb1Q91W78 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Usb1Q91W78 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19.68■□□□□ 0.74
Usb1Q91W78 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC19.68■□□□□ 0.74
Usb1Q91W78 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC19.68■□□□□ 0.74
Usb1Q91W78 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.68■□□□□ 0.74
Usb1Q91W78 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Usb1Q91W78 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Usb1Q91W78 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Usb1Q91W78 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Usb1Q91W78 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Usb1Q91W78 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Usb1Q91W78 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC19.67■□□□□ 0.74
Usb1Q91W78 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Usb1Q91W78 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Usb1Q91W78 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Usb1Q91W78 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Usb1Q91W78 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Usb1Q91W78 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Usb1Q91W78 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Usb1Q91W78 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Usb1Q91W78 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC19.66■□□□□ 0.74
Usb1Q91W78 Gm7143-201ENSMUST00000222811 859 ntBASIC19.66■□□□□ 0.74
Usb1Q91W78 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Usb1Q91W78 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Usb1Q91W78 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Usb1Q91W78 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Usb1Q91W78 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Usb1Q91W78 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Usb1Q91W78 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC19.66■□□□□ 0.74
Usb1Q91W78 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Usb1Q91W78 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC19.66■□□□□ 0.74
Usb1Q91W78 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Usb1Q91W78 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Usb1Q91W78 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Usb1Q91W78 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Usb1Q91W78 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Usb1Q91W78 AC124392.1-201ENSMUST00000225172 5324 ntBASIC19.65■□□□□ 0.74
Usb1Q91W78 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Usb1Q91W78 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Usb1Q91W78 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.74
Usb1Q91W78 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Usb1Q91W78 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
Usb1Q91W78 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC19.64■□□□□ 0.73
Usb1Q91W78 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Usb1Q91W78 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Usb1Q91W78 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Usb1Q91W78 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Usb1Q91W78 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Usb1Q91W78 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms