Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
TraipQ8VIG6 Gm40848-201ENSMUST00000221998 324 ntBASIC21.4■■□□□ 1.02
TraipQ8VIG6 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TraipQ8VIG6 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TraipQ8VIG6 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TraipQ8VIG6 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.02
TraipQ8VIG6 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
TraipQ8VIG6 AC137127.1-201ENSMUST00000213466 1078 ntBASIC21.39■■□□□ 1.01
TraipQ8VIG6 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
TraipQ8VIG6 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
TraipQ8VIG6 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
TraipQ8VIG6 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
TraipQ8VIG6 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
TraipQ8VIG6 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
TraipQ8VIG6 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TraipQ8VIG6 Gm10129-202ENSMUST00000193100 1316 ntBASIC21.38■■□□□ 1.01
TraipQ8VIG6 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC21.38■■□□□ 1.01
TraipQ8VIG6 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC21.38■■□□□ 1.01
TraipQ8VIG6 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
TraipQ8VIG6 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC21.38■■□□□ 1.01
TraipQ8VIG6 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
TraipQ8VIG6 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC21.38■■□□□ 1.01
TraipQ8VIG6 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
TraipQ8VIG6 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
TraipQ8VIG6 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TraipQ8VIG6 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
TraipQ8VIG6 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC21.37■■□□□ 1.01
TraipQ8VIG6 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC21.37■■□□□ 1.01
TraipQ8VIG6 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TraipQ8VIG6 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
TraipQ8VIG6 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
TraipQ8VIG6 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC21.36■■□□□ 1.01
TraipQ8VIG6 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TraipQ8VIG6 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
TraipQ8VIG6 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
TraipQ8VIG6 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TraipQ8VIG6 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC21.36■■□□□ 1.01
TraipQ8VIG6 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
TraipQ8VIG6 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
TraipQ8VIG6 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
TraipQ8VIG6 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
TraipQ8VIG6 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TraipQ8VIG6 Gm32051-202ENSMUST00000197905 2385 ntBASIC21.35■■□□□ 1.01
TraipQ8VIG6 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC21.35■■□□□ 1.01
TraipQ8VIG6 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TraipQ8VIG6 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
TraipQ8VIG6 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
TraipQ8VIG6 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC21.35■■□□□ 1.01
TraipQ8VIG6 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
TraipQ8VIG6 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
TraipQ8VIG6 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
TraipQ8VIG6 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC21.34■■□□□ 1.01
TraipQ8VIG6 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TraipQ8VIG6 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC21.34■■□□□ 1.01
TraipQ8VIG6 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
TraipQ8VIG6 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
TraipQ8VIG6 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TraipQ8VIG6 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TraipQ8VIG6 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC21.33■■□□□ 1.01
TraipQ8VIG6 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TraipQ8VIG6 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TraipQ8VIG6 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TraipQ8VIG6 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
TraipQ8VIG6 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
TraipQ8VIG6 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
TraipQ8VIG6 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
TraipQ8VIG6 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC21.33■■□□□ 1.01
TraipQ8VIG6 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TraipQ8VIG6 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
TraipQ8VIG6 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC21.32■■□□□ 1
TraipQ8VIG6 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TraipQ8VIG6 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TraipQ8VIG6 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
TraipQ8VIG6 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
TraipQ8VIG6 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TraipQ8VIG6 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TraipQ8VIG6 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TraipQ8VIG6 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC21.31■■□□□ 1
TraipQ8VIG6 Gm10849-201ENSMUST00000100397 618 ntBASIC21.31■■□□□ 1
TraipQ8VIG6 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
TraipQ8VIG6 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TraipQ8VIG6 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC21.31■■□□□ 1
TraipQ8VIG6 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC21.31■■□□□ 1
TraipQ8VIG6 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC21.31■■□□□ 1
TraipQ8VIG6 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC21.3■■□□□ 1
TraipQ8VIG6 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC21.3■■□□□ 1
TraipQ8VIG6 AC099934.2-201ENSMUST00000196389 70 ntBASIC21.3■■□□□ 1
TraipQ8VIG6 AC156953.1-201ENSMUST00000196953 70 ntBASIC21.3■■□□□ 1
TraipQ8VIG6 AC157822.2-201ENSMUST00000200291 70 ntBASIC21.3■■□□□ 1
TraipQ8VIG6 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
TraipQ8VIG6 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
TraipQ8VIG6 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TraipQ8VIG6 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TraipQ8VIG6 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC21.29■■□□□ 1
TraipQ8VIG6 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
TraipQ8VIG6 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
TraipQ8VIG6 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC21.28■■□□□ 1
TraipQ8VIG6 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TraipQ8VIG6 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
TraipQ8VIG6 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC21.28■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms