Protein–RNA interactions for Protein: Q8VHY0

Cspg4, Chondroitin sulfate proteoglycan 4, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg4Q8VHY0 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cspg4Q8VHY0 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC17.37■□□□□ 0.37
Cspg4Q8VHY0 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC17.37■□□□□ 0.37
Cspg4Q8VHY0 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cspg4Q8VHY0 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cspg4Q8VHY0 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cspg4Q8VHY0 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cspg4Q8VHY0 Gm10812-201ENSMUST00000099864 546 ntBASIC17.36■□□□□ 0.37
Cspg4Q8VHY0 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cspg4Q8VHY0 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC17.36■□□□□ 0.37
Cspg4Q8VHY0 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cspg4Q8VHY0 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC17.36■□□□□ 0.37
Cspg4Q8VHY0 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cspg4Q8VHY0 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Cspg4Q8VHY0 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cspg4Q8VHY0 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cspg4Q8VHY0 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cspg4Q8VHY0 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cspg4Q8VHY0 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Cspg4Q8VHY0 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Cspg4Q8VHY0 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Cspg4Q8VHY0 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cspg4Q8VHY0 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cspg4Q8VHY0 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Cspg4Q8VHY0 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC17.35■□□□□ 0.37
Cspg4Q8VHY0 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
Cspg4Q8VHY0 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Cspg4Q8VHY0 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Cspg4Q8VHY0 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cspg4Q8VHY0 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cspg4Q8VHY0 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cspg4Q8VHY0 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cspg4Q8VHY0 Gm13234-201ENSMUST00000120010 747 ntBASIC17.34■□□□□ 0.37
Cspg4Q8VHY0 Mir5133-201ENSMUST00000174955 77 ntBASIC17.34■□□□□ 0.37
Cspg4Q8VHY0 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC17.34■□□□□ 0.37
Cspg4Q8VHY0 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cspg4Q8VHY0 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Cspg4Q8VHY0 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Cspg4Q8VHY0 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cspg4Q8VHY0 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cspg4Q8VHY0 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC17.33■□□□□ 0.36
Cspg4Q8VHY0 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Cspg4Q8VHY0 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC17.33■□□□□ 0.36
Cspg4Q8VHY0 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC17.33■□□□□ 0.36
Cspg4Q8VHY0 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC17.32■□□□□ 0.36
Cspg4Q8VHY0 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cspg4Q8VHY0 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC17.32■□□□□ 0.36
Cspg4Q8VHY0 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cspg4Q8VHY0 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cspg4Q8VHY0 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cspg4Q8VHY0 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cspg4Q8VHY0 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC17.32■□□□□ 0.36
Cspg4Q8VHY0 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cspg4Q8VHY0 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cspg4Q8VHY0 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC17.32■□□□□ 0.36
Cspg4Q8VHY0 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cspg4Q8VHY0 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cspg4Q8VHY0 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cspg4Q8VHY0 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC17.32■□□□□ 0.36
Cspg4Q8VHY0 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cspg4Q8VHY0 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cspg4Q8VHY0 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cspg4Q8VHY0 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cspg4Q8VHY0 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cspg4Q8VHY0 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cspg4Q8VHY0 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Cspg4Q8VHY0 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cspg4Q8VHY0 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Cspg4Q8VHY0 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC17.31■□□□□ 0.36
Cspg4Q8VHY0 Ap3s1-204ENSMUST00000225520 957 ntBASIC17.31■□□□□ 0.36
Cspg4Q8VHY0 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Cspg4Q8VHY0 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cspg4Q8VHY0 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cspg4Q8VHY0 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cspg4Q8VHY0 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Cspg4Q8VHY0 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Cspg4Q8VHY0 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cspg4Q8VHY0 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cspg4Q8VHY0 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC17.3■□□□□ 0.36
Cspg4Q8VHY0 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cspg4Q8VHY0 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC17.3■□□□□ 0.36
Cspg4Q8VHY0 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cspg4Q8VHY0 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Cspg4Q8VHY0 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Cspg4Q8VHY0 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cspg4Q8VHY0 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cspg4Q8VHY0 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cspg4Q8VHY0 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cspg4Q8VHY0 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Cspg4Q8VHY0 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cspg4Q8VHY0 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cspg4Q8VHY0 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC17.29■□□□□ 0.36
Cspg4Q8VHY0 Gm13148-201ENSMUST00000118892 745 ntBASIC17.29■□□□□ 0.36
Cspg4Q8VHY0 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Cspg4Q8VHY0 Gm3807-201ENSMUST00000193520 1168 ntBASIC17.29■□□□□ 0.36
Cspg4Q8VHY0 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cspg4Q8VHY0 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cspg4Q8VHY0 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cspg4Q8VHY0 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cspg4Q8VHY0 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms