Protein–RNA interactions for Protein: Q8VDB9

Slc6a20a, Sodium- and chloride-dependent transporter XTRP3A, mousemouse

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a20aQ8VDB9 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Slc6a20aQ8VDB9 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Slc6a20aQ8VDB9 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Slc6a20aQ8VDB9 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Slc6a20aQ8VDB9 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Slc6a20aQ8VDB9 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Slc6a20aQ8VDB9 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Slc6a20aQ8VDB9 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Slc6a20aQ8VDB9 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Slc6a20aQ8VDB9 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC19.78■□□□□ 0.76
Slc6a20aQ8VDB9 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC19.77■□□□□ 0.76
Slc6a20aQ8VDB9 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Slc6a20aQ8VDB9 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Slc6a20aQ8VDB9 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC19.77■□□□□ 0.76
Slc6a20aQ8VDB9 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC19.77■□□□□ 0.76
Slc6a20aQ8VDB9 Gm10657-201ENSMUST00000193528 1031 ntBASIC19.77■□□□□ 0.76
Slc6a20aQ8VDB9 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Slc6a20aQ8VDB9 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Slc6a20aQ8VDB9 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Slc6a20aQ8VDB9 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Slc6a20aQ8VDB9 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Slc6a20aQ8VDB9 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Slc6a20aQ8VDB9 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Slc6a20aQ8VDB9 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Slc6a20aQ8VDB9 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Slc6a20aQ8VDB9 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Slc6a20aQ8VDB9 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC19.76■□□□□ 0.75
Slc6a20aQ8VDB9 Gm22238-201ENSMUST00000175222 88 ntBASIC19.76■□□□□ 0.75
Slc6a20aQ8VDB9 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC19.76■□□□□ 0.75
Slc6a20aQ8VDB9 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC19.76■□□□□ 0.75
Slc6a20aQ8VDB9 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Slc6a20aQ8VDB9 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Slc6a20aQ8VDB9 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Slc6a20aQ8VDB9 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Slc6a20aQ8VDB9 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Slc6a20aQ8VDB9 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Slc6a20aQ8VDB9 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Slc6a20aQ8VDB9 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC19.75■□□□□ 0.75
Slc6a20aQ8VDB9 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Slc6a20aQ8VDB9 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Slc6a20aQ8VDB9 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Slc6a20aQ8VDB9 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Slc6a20aQ8VDB9 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Slc6a20aQ8VDB9 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Slc6a20aQ8VDB9 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Slc6a20aQ8VDB9 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.74■□□□□ 0.75
Slc6a20aQ8VDB9 Gm14117-201ENSMUST00000122417 843 ntBASIC19.74■□□□□ 0.75
Slc6a20aQ8VDB9 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Slc6a20aQ8VDB9 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC19.74■□□□□ 0.75
Slc6a20aQ8VDB9 Gm43530-201ENSMUST00000195920 274 ntBASIC19.74■□□□□ 0.75
Slc6a20aQ8VDB9 Gm45102-201ENSMUST00000207427 857 ntBASIC19.74■□□□□ 0.75
Slc6a20aQ8VDB9 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Slc6a20aQ8VDB9 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Slc6a20aQ8VDB9 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Slc6a20aQ8VDB9 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Slc6a20aQ8VDB9 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Slc6a20aQ8VDB9 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Slc6a20aQ8VDB9 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Slc6a20aQ8VDB9 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Slc6a20aQ8VDB9 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Slc6a20aQ8VDB9 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Slc6a20aQ8VDB9 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Slc6a20aQ8VDB9 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Slc6a20aQ8VDB9 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Slc6a20aQ8VDB9 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Slc6a20aQ8VDB9 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Slc6a20aQ8VDB9 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Slc6a20aQ8VDB9 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC19.72■□□□□ 0.75
Slc6a20aQ8VDB9 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Slc6a20aQ8VDB9 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC19.72■□□□□ 0.75
Slc6a20aQ8VDB9 Rps24-207ENSMUST00000224568 714 ntBASIC19.72■□□□□ 0.75
Slc6a20aQ8VDB9 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Slc6a20aQ8VDB9 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
Slc6a20aQ8VDB9 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Slc6a20aQ8VDB9 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Slc6a20aQ8VDB9 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Slc6a20aQ8VDB9 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Slc6a20aQ8VDB9 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC19.72■□□□□ 0.75
Slc6a20aQ8VDB9 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Slc6a20aQ8VDB9 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Slc6a20aQ8VDB9 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Slc6a20aQ8VDB9 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Slc6a20aQ8VDB9 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Slc6a20aQ8VDB9 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Slc6a20aQ8VDB9 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Slc6a20aQ8VDB9 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Slc6a20aQ8VDB9 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC19.7■□□□□ 0.74
Slc6a20aQ8VDB9 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC19.7■□□□□ 0.74
Slc6a20aQ8VDB9 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Slc6a20aQ8VDB9 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Slc6a20aQ8VDB9 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Slc6a20aQ8VDB9 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Slc6a20aQ8VDB9 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Slc6a20aQ8VDB9 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Slc6a20aQ8VDB9 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Slc6a20aQ8VDB9 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Slc6a20aQ8VDB9 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC19.69■□□□□ 0.74
Slc6a20aQ8VDB9 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Slc6a20aQ8VDB9 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Slc6a20aQ8VDB9 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC19.69■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 9.5 ms