Protein–RNA interactions for Protein: Q8R550

Sh3kbp1, SH3 domain-containing kinase-binding protein 1, mousemouse

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3kbp1Q8R550 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC20.59■□□□□ 0.89
Sh3kbp1Q8R550 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Sh3kbp1Q8R550 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sh3kbp1Q8R550 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Sh3kbp1Q8R550 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Sh3kbp1Q8R550 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Sh3kbp1Q8R550 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Sh3kbp1Q8R550 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Sh3kbp1Q8R550 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Sh3kbp1Q8R550 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
Sh3kbp1Q8R550 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Sh3kbp1Q8R550 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Sh3kbp1Q8R550 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Sh3kbp1Q8R550 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC20.58■□□□□ 0.88
Sh3kbp1Q8R550 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Sh3kbp1Q8R550 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sh3kbp1Q8R550 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Sh3kbp1Q8R550 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC20.57■□□□□ 0.88
Sh3kbp1Q8R550 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sh3kbp1Q8R550 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC20.57■□□□□ 0.88
Sh3kbp1Q8R550 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Sh3kbp1Q8R550 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sh3kbp1Q8R550 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC20.57■□□□□ 0.88
Sh3kbp1Q8R550 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC20.57■□□□□ 0.88
Sh3kbp1Q8R550 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Sh3kbp1Q8R550 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sh3kbp1Q8R550 AC122428.2-201ENSMUST00000216321 1832 ntBASIC20.57■□□□□ 0.88
Sh3kbp1Q8R550 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sh3kbp1Q8R550 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sh3kbp1Q8R550 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sh3kbp1Q8R550 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sh3kbp1Q8R550 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sh3kbp1Q8R550 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sh3kbp1Q8R550 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sh3kbp1Q8R550 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sh3kbp1Q8R550 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Sh3kbp1Q8R550 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sh3kbp1Q8R550 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.56■□□□□ 0.88
Sh3kbp1Q8R550 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Sh3kbp1Q8R550 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Sh3kbp1Q8R550 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Sh3kbp1Q8R550 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Sh3kbp1Q8R550 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Sh3kbp1Q8R550 Gm8770-201ENSMUST00000121113 1109 ntBASIC20.55■□□□□ 0.88
Sh3kbp1Q8R550 Gm43017-201ENSMUST00000198296 752 ntBASIC20.55■□□□□ 0.88
Sh3kbp1Q8R550 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Sh3kbp1Q8R550 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Sh3kbp1Q8R550 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Sh3kbp1Q8R550 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Sh3kbp1Q8R550 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Sh3kbp1Q8R550 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sh3kbp1Q8R550 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Sh3kbp1Q8R550 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Sh3kbp1Q8R550 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC20.54■□□□□ 0.88
Sh3kbp1Q8R550 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sh3kbp1Q8R550 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Sh3kbp1Q8R550 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.54■□□□□ 0.88
Sh3kbp1Q8R550 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sh3kbp1Q8R550 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sh3kbp1Q8R550 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sh3kbp1Q8R550 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC20.53■□□□□ 0.88
Sh3kbp1Q8R550 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sh3kbp1Q8R550 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Sh3kbp1Q8R550 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Sh3kbp1Q8R550 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
Sh3kbp1Q8R550 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sh3kbp1Q8R550 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sh3kbp1Q8R550 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sh3kbp1Q8R550 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Sh3kbp1Q8R550 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Sh3kbp1Q8R550 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
Sh3kbp1Q8R550 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Sh3kbp1Q8R550 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC20.52■□□□□ 0.88
Sh3kbp1Q8R550 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Sh3kbp1Q8R550 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sh3kbp1Q8R550 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
Sh3kbp1Q8R550 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sh3kbp1Q8R550 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Sh3kbp1Q8R550 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sh3kbp1Q8R550 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC20.51■□□□□ 0.87
Sh3kbp1Q8R550 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sh3kbp1Q8R550 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Sh3kbp1Q8R550 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Sh3kbp1Q8R550 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Sh3kbp1Q8R550 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Sh3kbp1Q8R550 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC20.5■□□□□ 0.87
Sh3kbp1Q8R550 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Sh3kbp1Q8R550 Gm18284-201ENSMUST00000172604 624 ntBASIC20.5■□□□□ 0.87
Sh3kbp1Q8R550 Gm8495-201ENSMUST00000188740 694 ntBASIC20.5■□□□□ 0.87
Sh3kbp1Q8R550 Gm21168-201ENSMUST00000199646 1096 ntBASIC20.5■□□□□ 0.87
Sh3kbp1Q8R550 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Sh3kbp1Q8R550 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Sh3kbp1Q8R550 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sh3kbp1Q8R550 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sh3kbp1Q8R550 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC20.49■□□□□ 0.87
Sh3kbp1Q8R550 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
Sh3kbp1Q8R550 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sh3kbp1Q8R550 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC20.49■□□□□ 0.87
Sh3kbp1Q8R550 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC20.49■□□□□ 0.87
Sh3kbp1Q8R550 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms