Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC25.78■■□□□ 1.72
Chmp7Q8R1T1 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Chmp7Q8R1T1 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC25.78■■□□□ 1.72
Chmp7Q8R1T1 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC25.77■■□□□ 1.72
Chmp7Q8R1T1 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC25.77■■□□□ 1.72
Chmp7Q8R1T1 AV356131-201ENSMUST00000206201 750 ntBASIC25.77■■□□□ 1.72
Chmp7Q8R1T1 Gm26766-202ENSMUST00000227544 2347 ntBASIC25.77■■□□□ 1.72
Chmp7Q8R1T1 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
Chmp7Q8R1T1 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Chmp7Q8R1T1 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC25.77■■□□□ 1.72
Chmp7Q8R1T1 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Chmp7Q8R1T1 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC25.76■■□□□ 1.71
Chmp7Q8R1T1 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC25.76■■□□□ 1.71
Chmp7Q8R1T1 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC25.76■■□□□ 1.71
Chmp7Q8R1T1 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC25.76■■□□□ 1.71
Chmp7Q8R1T1 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
Chmp7Q8R1T1 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
Chmp7Q8R1T1 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Chmp7Q8R1T1 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Chmp7Q8R1T1 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
Chmp7Q8R1T1 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC25.75■■□□□ 1.71
Chmp7Q8R1T1 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Chmp7Q8R1T1 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Chmp7Q8R1T1 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Chmp7Q8R1T1 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC25.74■■□□□ 1.71
Chmp7Q8R1T1 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Chmp7Q8R1T1 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
Chmp7Q8R1T1 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Chmp7Q8R1T1 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Chmp7Q8R1T1 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Chmp7Q8R1T1 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Chmp7Q8R1T1 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
Chmp7Q8R1T1 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC25.73■■□□□ 1.71
Chmp7Q8R1T1 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
Chmp7Q8R1T1 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC25.73■■□□□ 1.71
Chmp7Q8R1T1 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC25.73■■□□□ 1.71
Chmp7Q8R1T1 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC25.72■■□□□ 1.71
Chmp7Q8R1T1 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC25.72■■□□□ 1.71
Chmp7Q8R1T1 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC25.72■■□□□ 1.71
Chmp7Q8R1T1 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC25.72■■□□□ 1.71
Chmp7Q8R1T1 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
Chmp7Q8R1T1 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC25.72■■□□□ 1.71
Chmp7Q8R1T1 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Chmp7Q8R1T1 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Chmp7Q8R1T1 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Chmp7Q8R1T1 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC25.72■■□□□ 1.71
Chmp7Q8R1T1 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Chmp7Q8R1T1 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC25.72■■□□□ 1.71
Chmp7Q8R1T1 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC25.71■■□□□ 1.71
Chmp7Q8R1T1 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
Chmp7Q8R1T1 Spcs1-207ENSMUST00000228767 1008 ntBASIC25.71■■□□□ 1.71
Chmp7Q8R1T1 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Chmp7Q8R1T1 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC25.71■■□□□ 1.71
Chmp7Q8R1T1 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
Chmp7Q8R1T1 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC25.7■■□□□ 1.7
Chmp7Q8R1T1 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC25.7■■□□□ 1.7
Chmp7Q8R1T1 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Chmp7Q8R1T1 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Chmp7Q8R1T1 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC25.69■■□□□ 1.7
Chmp7Q8R1T1 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
Chmp7Q8R1T1 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Chmp7Q8R1T1 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Chmp7Q8R1T1 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC25.69■■□□□ 1.7
Chmp7Q8R1T1 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Chmp7Q8R1T1 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC25.69■■□□□ 1.7
Chmp7Q8R1T1 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
Chmp7Q8R1T1 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Chmp7Q8R1T1 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Chmp7Q8R1T1 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC25.68■■□□□ 1.7
Chmp7Q8R1T1 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC25.68■■□□□ 1.7
Chmp7Q8R1T1 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC25.68■■□□□ 1.7
Chmp7Q8R1T1 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
Chmp7Q8R1T1 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC25.67■■□□□ 1.7
Chmp7Q8R1T1 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC25.67■■□□□ 1.7
Chmp7Q8R1T1 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
Chmp7Q8R1T1 Gm9988-201ENSMUST00000069786 435 ntBASIC25.67■■□□□ 1.7
Chmp7Q8R1T1 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Chmp7Q8R1T1 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Chmp7Q8R1T1 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Chmp7Q8R1T1 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Chmp7Q8R1T1 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC25.67■■□□□ 1.7
Chmp7Q8R1T1 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
Chmp7Q8R1T1 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC25.66■■□□□ 1.7
Chmp7Q8R1T1 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Chmp7Q8R1T1 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Chmp7Q8R1T1 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Chmp7Q8R1T1 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Chmp7Q8R1T1 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Chmp7Q8R1T1 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Chmp7Q8R1T1 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC25.65■■□□□ 1.7
Chmp7Q8R1T1 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC25.65■■□□□ 1.7
Chmp7Q8R1T1 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC25.65■■□□□ 1.7
Chmp7Q8R1T1 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
Chmp7Q8R1T1 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Chmp7Q8R1T1 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Chmp7Q8R1T1 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC25.65■■□□□ 1.7
Chmp7Q8R1T1 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
Chmp7Q8R1T1 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
Chmp7Q8R1T1 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC25.64■■□□□ 1.7
Chmp7Q8R1T1 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms