Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Rpp40Q8R1F9 Spcs1-204ENSMUST00000226782 949 ntBASIC21.53■■□□□ 1.04
Rpp40Q8R1F9 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Rpp40Q8R1F9 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Rpp40Q8R1F9 Gm10209-201ENSMUST00000203397 1607 ntBASIC21.53■■□□□ 1.04
Rpp40Q8R1F9 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Rpp40Q8R1F9 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Rpp40Q8R1F9 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC21.53■■□□□ 1.04
Rpp40Q8R1F9 Gm38160-201ENSMUST00000193090 2499 ntBASIC21.53■■□□□ 1.04
Rpp40Q8R1F9 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Rpp40Q8R1F9 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
Rpp40Q8R1F9 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Rpp40Q8R1F9 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC21.52■■□□□ 1.04
Rpp40Q8R1F9 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
Rpp40Q8R1F9 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
Rpp40Q8R1F9 Gm8493-201ENSMUST00000196881 489 ntBASIC21.52■■□□□ 1.04
Rpp40Q8R1F9 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
Rpp40Q8R1F9 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Rpp40Q8R1F9 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Rpp40Q8R1F9 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Rpp40Q8R1F9 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC21.52■■□□□ 1.04
Rpp40Q8R1F9 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.03
Rpp40Q8R1F9 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Rpp40Q8R1F9 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Rpp40Q8R1F9 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Rpp40Q8R1F9 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Rpp40Q8R1F9 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
Rpp40Q8R1F9 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Rpp40Q8R1F9 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC21.51■■□□□ 1.03
Rpp40Q8R1F9 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC21.51■■□□□ 1.03
Rpp40Q8R1F9 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Rpp40Q8R1F9 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Rpp40Q8R1F9 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Rpp40Q8R1F9 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC21.51■■□□□ 1.03
Rpp40Q8R1F9 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC21.51■■□□□ 1.03
Rpp40Q8R1F9 Gm7160-202ENSMUST00000188519 1027 ntBASIC21.51■■□□□ 1.03
Rpp40Q8R1F9 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Rpp40Q8R1F9 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Rpp40Q8R1F9 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Rpp40Q8R1F9 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Rpp40Q8R1F9 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Rpp40Q8R1F9 Gm43173-201ENSMUST00000202246 593 ntBASIC21.5■■□□□ 1.03
Rpp40Q8R1F9 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Rpp40Q8R1F9 Wdr70-203ENSMUST00000227371 1130 ntBASIC21.5■■□□□ 1.03
Rpp40Q8R1F9 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Rpp40Q8R1F9 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
Rpp40Q8R1F9 Gm37035-201ENSMUST00000194809 2148 ntBASIC21.5■■□□□ 1.03
Rpp40Q8R1F9 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Rpp40Q8R1F9 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Rpp40Q8R1F9 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Rpp40Q8R1F9 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC21.49■■□□□ 1.03
Rpp40Q8R1F9 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
Rpp40Q8R1F9 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC21.49■■□□□ 1.03
Rpp40Q8R1F9 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Rpp40Q8R1F9 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
Rpp40Q8R1F9 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Rpp40Q8R1F9 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
Rpp40Q8R1F9 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
Rpp40Q8R1F9 Flvcr1-202ENSMUST00000191946 1216 ntBASIC21.48■■□□□ 1.03
Rpp40Q8R1F9 Serp2-204ENSMUST00000228055 705 ntBASIC21.48■■□□□ 1.03
Rpp40Q8R1F9 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC21.48■■□□□ 1.03
Rpp40Q8R1F9 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC21.48■■□□□ 1.03
Rpp40Q8R1F9 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Rpp40Q8R1F9 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Rpp40Q8R1F9 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC21.47■■□□□ 1.03
Rpp40Q8R1F9 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Rpp40Q8R1F9 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Rpp40Q8R1F9 Gm43006-201ENSMUST00000197702 1602 ntBASIC21.47■■□□□ 1.03
Rpp40Q8R1F9 AC152827.1-201ENSMUST00000221143 2189 ntBASIC21.47■■□□□ 1.03
Rpp40Q8R1F9 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Rpp40Q8R1F9 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Rpp40Q8R1F9 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Rpp40Q8R1F9 Gm43017-201ENSMUST00000198296 752 ntBASIC21.46■■□□□ 1.03
Rpp40Q8R1F9 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Rpp40Q8R1F9 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Rpp40Q8R1F9 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
Rpp40Q8R1F9 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
Rpp40Q8R1F9 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Rpp40Q8R1F9 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Rpp40Q8R1F9 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
Rpp40Q8R1F9 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Rpp40Q8R1F9 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
Rpp40Q8R1F9 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Rpp40Q8R1F9 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Rpp40Q8R1F9 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Rpp40Q8R1F9 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Rpp40Q8R1F9 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Rpp40Q8R1F9 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Rpp40Q8R1F9 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC21.44■■□□□ 1.02
Rpp40Q8R1F9 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC21.44■■□□□ 1.02
Rpp40Q8R1F9 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Rpp40Q8R1F9 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC21.44■■□□□ 1.02
Rpp40Q8R1F9 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Rpp40Q8R1F9 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Rpp40Q8R1F9 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Rpp40Q8R1F9 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rpp40Q8R1F9 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rpp40Q8R1F9 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rpp40Q8R1F9 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC21.43■■□□□ 1.02
Rpp40Q8R1F9 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms