Protein–RNA interactions for Protein: Q8CIR4

Trpm6, Transient receptor potential cation channel subfamily M member 6, mousemouse

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpm6Q8CIR4 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trpm6Q8CIR4 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC20.24■□□□□ 0.83
Trpm6Q8CIR4 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Trpm6Q8CIR4 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trpm6Q8CIR4 Mir6236-201ENSMUST00000184437 123 ntBASIC20.23■□□□□ 0.83
Trpm6Q8CIR4 AV356131-201ENSMUST00000206201 750 ntBASIC20.23■□□□□ 0.83
Trpm6Q8CIR4 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trpm6Q8CIR4 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trpm6Q8CIR4 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trpm6Q8CIR4 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Trpm6Q8CIR4 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trpm6Q8CIR4 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trpm6Q8CIR4 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Trpm6Q8CIR4 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
Trpm6Q8CIR4 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Trpm6Q8CIR4 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Trpm6Q8CIR4 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Trpm6Q8CIR4 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trpm6Q8CIR4 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Trpm6Q8CIR4 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trpm6Q8CIR4 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trpm6Q8CIR4 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC20.22■□□□□ 0.83
Trpm6Q8CIR4 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trpm6Q8CIR4 AC122428.2-201ENSMUST00000216321 1832 ntBASIC20.22■□□□□ 0.83
Trpm6Q8CIR4 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trpm6Q8CIR4 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC20.21■□□□□ 0.83
Trpm6Q8CIR4 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Trpm6Q8CIR4 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC20.21■□□□□ 0.83
Trpm6Q8CIR4 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC20.21■□□□□ 0.83
Trpm6Q8CIR4 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
Trpm6Q8CIR4 Gm32051-202ENSMUST00000197905 2385 ntBASIC20.21■□□□□ 0.83
Trpm6Q8CIR4 Gm14281-201ENSMUST00000121700 1294 ntBASIC20.2■□□□□ 0.83
Trpm6Q8CIR4 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC20.2■□□□□ 0.83
Trpm6Q8CIR4 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
Trpm6Q8CIR4 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC20.2■□□□□ 0.82
Trpm6Q8CIR4 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trpm6Q8CIR4 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC20.2■□□□□ 0.82
Trpm6Q8CIR4 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trpm6Q8CIR4 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trpm6Q8CIR4 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trpm6Q8CIR4 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trpm6Q8CIR4 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trpm6Q8CIR4 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trpm6Q8CIR4 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trpm6Q8CIR4 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Trpm6Q8CIR4 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trpm6Q8CIR4 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trpm6Q8CIR4 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trpm6Q8CIR4 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC20.19■□□□□ 0.82
Trpm6Q8CIR4 Gm27801-201ENSMUST00000184174 223 ntBASIC20.19■□□□□ 0.82
Trpm6Q8CIR4 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Trpm6Q8CIR4 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC20.18■□□□□ 0.82
Trpm6Q8CIR4 Gm42778-201ENSMUST00000199644 553 ntBASIC20.18■□□□□ 0.82
Trpm6Q8CIR4 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trpm6Q8CIR4 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Trpm6Q8CIR4 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.18■□□□□ 0.82
Trpm6Q8CIR4 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trpm6Q8CIR4 Spcs1-207ENSMUST00000228767 1008 ntBASIC20.17■□□□□ 0.82
Trpm6Q8CIR4 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Trpm6Q8CIR4 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC20.17■□□□□ 0.82
Trpm6Q8CIR4 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trpm6Q8CIR4 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC20.17■□□□□ 0.82
Trpm6Q8CIR4 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trpm6Q8CIR4 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trpm6Q8CIR4 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trpm6Q8CIR4 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trpm6Q8CIR4 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trpm6Q8CIR4 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trpm6Q8CIR4 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC20.16■□□□□ 0.82
Trpm6Q8CIR4 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trpm6Q8CIR4 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trpm6Q8CIR4 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Trpm6Q8CIR4 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trpm6Q8CIR4 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trpm6Q8CIR4 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trpm6Q8CIR4 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC20.15■□□□□ 0.82
Trpm6Q8CIR4 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC20.15■□□□□ 0.82
Trpm6Q8CIR4 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Trpm6Q8CIR4 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trpm6Q8CIR4 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trpm6Q8CIR4 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trpm6Q8CIR4 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trpm6Q8CIR4 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Trpm6Q8CIR4 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC20.15■□□□□ 0.82
Trpm6Q8CIR4 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC20.15■□□□□ 0.82
Trpm6Q8CIR4 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trpm6Q8CIR4 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Trpm6Q8CIR4 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Trpm6Q8CIR4 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trpm6Q8CIR4 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Trpm6Q8CIR4 Gm18671-201ENSMUST00000214826 683 ntBASIC20.14■□□□□ 0.81
Trpm6Q8CIR4 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trpm6Q8CIR4 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Trpm6Q8CIR4 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Trpm6Q8CIR4 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trpm6Q8CIR4 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
Trpm6Q8CIR4 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trpm6Q8CIR4 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trpm6Q8CIR4 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trpm6Q8CIR4 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms