Protein–RNA interactions for Protein: Q8CIG0

Depdc1a, DEP domain-containing protein 1A, mousemouse

Predictions only

Length 804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1aQ8CIG0 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Depdc1aQ8CIG0 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Depdc1aQ8CIG0 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Depdc1aQ8CIG0 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC22.74■■□□□ 1.23
Depdc1aQ8CIG0 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC22.74■■□□□ 1.23
Depdc1aQ8CIG0 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Depdc1aQ8CIG0 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Depdc1aQ8CIG0 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC22.73■■□□□ 1.23
Depdc1aQ8CIG0 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC22.73■■□□□ 1.23
Depdc1aQ8CIG0 Gm18284-201ENSMUST00000172604 624 ntBASIC22.73■■□□□ 1.23
Depdc1aQ8CIG0 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC22.73■■□□□ 1.23
Depdc1aQ8CIG0 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC22.73■■□□□ 1.23
Depdc1aQ8CIG0 Gm40848-201ENSMUST00000221998 324 ntBASIC22.73■■□□□ 1.23
Depdc1aQ8CIG0 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC22.73■■□□□ 1.23
Depdc1aQ8CIG0 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Depdc1aQ8CIG0 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC22.72■■□□□ 1.23
Depdc1aQ8CIG0 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
Depdc1aQ8CIG0 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
Depdc1aQ8CIG0 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
Depdc1aQ8CIG0 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC22.72■■□□□ 1.23
Depdc1aQ8CIG0 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
Depdc1aQ8CIG0 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC22.71■■□□□ 1.23
Depdc1aQ8CIG0 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Depdc1aQ8CIG0 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC22.71■■□□□ 1.23
Depdc1aQ8CIG0 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Depdc1aQ8CIG0 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC22.71■■□□□ 1.23
Depdc1aQ8CIG0 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Depdc1aQ8CIG0 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Depdc1aQ8CIG0 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Depdc1aQ8CIG0 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC22.71■■□□□ 1.23
Depdc1aQ8CIG0 Gm43060-201ENSMUST00000200621 289 ntBASIC22.71■■□□□ 1.23
Depdc1aQ8CIG0 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC22.71■■□□□ 1.23
Depdc1aQ8CIG0 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Depdc1aQ8CIG0 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC22.71■■□□□ 1.23
Depdc1aQ8CIG0 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Depdc1aQ8CIG0 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
Depdc1aQ8CIG0 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Depdc1aQ8CIG0 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Depdc1aQ8CIG0 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
Depdc1aQ8CIG0 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC22.7■■□□□ 1.22
Depdc1aQ8CIG0 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Depdc1aQ8CIG0 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
Depdc1aQ8CIG0 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
Depdc1aQ8CIG0 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Depdc1aQ8CIG0 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Depdc1aQ8CIG0 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Depdc1aQ8CIG0 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC22.69■■□□□ 1.22
Depdc1aQ8CIG0 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Depdc1aQ8CIG0 Gm8495-201ENSMUST00000188740 694 ntBASIC22.69■■□□□ 1.22
Depdc1aQ8CIG0 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC22.69■■□□□ 1.22
Depdc1aQ8CIG0 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC22.69■■□□□ 1.22
Depdc1aQ8CIG0 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Depdc1aQ8CIG0 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
Depdc1aQ8CIG0 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Depdc1aQ8CIG0 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Depdc1aQ8CIG0 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC22.68■■□□□ 1.22
Depdc1aQ8CIG0 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Depdc1aQ8CIG0 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
Depdc1aQ8CIG0 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
Depdc1aQ8CIG0 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Depdc1aQ8CIG0 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Depdc1aQ8CIG0 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
Depdc1aQ8CIG0 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Depdc1aQ8CIG0 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Depdc1aQ8CIG0 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Depdc1aQ8CIG0 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Depdc1aQ8CIG0 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Depdc1aQ8CIG0 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
Depdc1aQ8CIG0 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Depdc1aQ8CIG0 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
Depdc1aQ8CIG0 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Depdc1aQ8CIG0 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Depdc1aQ8CIG0 Snhg20-203ENSMUST00000182811 2153 ntBASIC22.65■■□□□ 1.22
Depdc1aQ8CIG0 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Depdc1aQ8CIG0 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC22.65■■□□□ 1.22
Depdc1aQ8CIG0 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Depdc1aQ8CIG0 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Depdc1aQ8CIG0 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Depdc1aQ8CIG0 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC22.65■■□□□ 1.22
Depdc1aQ8CIG0 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC22.64■■□□□ 1.22
Depdc1aQ8CIG0 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC22.64■■□□□ 1.22
Depdc1aQ8CIG0 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Depdc1aQ8CIG0 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
Depdc1aQ8CIG0 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Depdc1aQ8CIG0 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC22.64■■□□□ 1.21
Depdc1aQ8CIG0 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Depdc1aQ8CIG0 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Depdc1aQ8CIG0 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC22.64■■□□□ 1.21
Depdc1aQ8CIG0 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Depdc1aQ8CIG0 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC22.64■■□□□ 1.21
Depdc1aQ8CIG0 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
Depdc1aQ8CIG0 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Depdc1aQ8CIG0 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Depdc1aQ8CIG0 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC22.63■■□□□ 1.21
Depdc1aQ8CIG0 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC22.63■■□□□ 1.21
Depdc1aQ8CIG0 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Depdc1aQ8CIG0 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
Depdc1aQ8CIG0 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Depdc1aQ8CIG0 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Depdc1aQ8CIG0 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC22.63■■□□□ 1.21
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms