Protein–RNA interactions for Protein: Q8CI71

Vps50, Syndetin, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps50Q8CI71 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Vps50Q8CI71 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Vps50Q8CI71 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Vps50Q8CI71 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Vps50Q8CI71 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
Vps50Q8CI71 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Vps50Q8CI71 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Vps50Q8CI71 Gm10620-201ENSMUST00000098379 1332 ntBASIC19.51■□□□□ 0.71
Vps50Q8CI71 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Vps50Q8CI71 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Vps50Q8CI71 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Vps50Q8CI71 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC19.51■□□□□ 0.71
Vps50Q8CI71 Gm12922-201ENSMUST00000120626 809 ntBASIC19.51■□□□□ 0.71
Vps50Q8CI71 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC19.51■□□□□ 0.71
Vps50Q8CI71 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Vps50Q8CI71 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Vps50Q8CI71 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Vps50Q8CI71 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Vps50Q8CI71 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Vps50Q8CI71 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Vps50Q8CI71 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Vps50Q8CI71 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
Vps50Q8CI71 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Vps50Q8CI71 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Vps50Q8CI71 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Vps50Q8CI71 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Vps50Q8CI71 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC19.5■□□□□ 0.71
Vps50Q8CI71 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Vps50Q8CI71 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Vps50Q8CI71 Gm43034-201ENSMUST00000198678 1364 ntBASIC19.49■□□□□ 0.71
Vps50Q8CI71 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC19.49■□□□□ 0.71
Vps50Q8CI71 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Vps50Q8CI71 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Vps50Q8CI71 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Vps50Q8CI71 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Vps50Q8CI71 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Vps50Q8CI71 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Vps50Q8CI71 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Vps50Q8CI71 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Vps50Q8CI71 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Vps50Q8CI71 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Vps50Q8CI71 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Vps50Q8CI71 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Vps50Q8CI71 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Vps50Q8CI71 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Vps50Q8CI71 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Vps50Q8CI71 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Vps50Q8CI71 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC19.47■□□□□ 0.71
Vps50Q8CI71 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Vps50Q8CI71 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Vps50Q8CI71 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Vps50Q8CI71 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Vps50Q8CI71 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Vps50Q8CI71 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Vps50Q8CI71 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Vps50Q8CI71 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Vps50Q8CI71 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Vps50Q8CI71 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Vps50Q8CI71 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Vps50Q8CI71 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Vps50Q8CI71 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC19.46■□□□□ 0.71
Vps50Q8CI71 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC19.46■□□□□ 0.71
Vps50Q8CI71 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Vps50Q8CI71 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Vps50Q8CI71 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Vps50Q8CI71 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Vps50Q8CI71 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Vps50Q8CI71 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Vps50Q8CI71 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Vps50Q8CI71 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Vps50Q8CI71 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Vps50Q8CI71 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Vps50Q8CI71 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Vps50Q8CI71 Gm5913-201ENSMUST00000119397 1399 ntBASIC19.45■□□□□ 0.7
Vps50Q8CI71 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Vps50Q8CI71 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Vps50Q8CI71 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Vps50Q8CI71 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC19.45■□□□□ 0.7
Vps50Q8CI71 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC19.45■□□□□ 0.7
Vps50Q8CI71 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Vps50Q8CI71 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.45■□□□□ 0.7
Vps50Q8CI71 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Vps50Q8CI71 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Vps50Q8CI71 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Vps50Q8CI71 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Vps50Q8CI71 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Vps50Q8CI71 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Vps50Q8CI71 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC19.44■□□□□ 0.7
Vps50Q8CI71 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Vps50Q8CI71 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Vps50Q8CI71 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Vps50Q8CI71 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Vps50Q8CI71 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC19.44■□□□□ 0.7
Vps50Q8CI71 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC19.44■□□□□ 0.7
Vps50Q8CI71 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Vps50Q8CI71 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vps50Q8CI71 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Vps50Q8CI71 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC19.43■□□□□ 0.7
Vps50Q8CI71 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vps50Q8CI71 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms