Protein–RNA interactions for Protein: Q8CGF5

Tmem56, Transmembrane protein 56, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem56Q8CGF5 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tmem56Q8CGF5 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Tmem56Q8CGF5 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tmem56Q8CGF5 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Tmem56Q8CGF5 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tmem56Q8CGF5 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tmem56Q8CGF5 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tmem56Q8CGF5 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tmem56Q8CGF5 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tmem56Q8CGF5 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tmem56Q8CGF5 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Tmem56Q8CGF5 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Tmem56Q8CGF5 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tmem56Q8CGF5 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tmem56Q8CGF5 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tmem56Q8CGF5 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tmem56Q8CGF5 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tmem56Q8CGF5 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Tmem56Q8CGF5 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tmem56Q8CGF5 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tmem56Q8CGF5 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC17.13■□□□□ 0.33
Tmem56Q8CGF5 Mir6236-201ENSMUST00000184437 123 ntBASIC17.13■□□□□ 0.33
Tmem56Q8CGF5 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tmem56Q8CGF5 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tmem56Q8CGF5 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tmem56Q8CGF5 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tmem56Q8CGF5 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tmem56Q8CGF5 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tmem56Q8CGF5 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC17.12■□□□□ 0.33
Tmem56Q8CGF5 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tmem56Q8CGF5 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC17.12■□□□□ 0.33
Tmem56Q8CGF5 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Tmem56Q8CGF5 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tmem56Q8CGF5 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tmem56Q8CGF5 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Tmem56Q8CGF5 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Tmem56Q8CGF5 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Tmem56Q8CGF5 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tmem56Q8CGF5 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Tmem56Q8CGF5 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tmem56Q8CGF5 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tmem56Q8CGF5 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tmem56Q8CGF5 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tmem56Q8CGF5 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tmem56Q8CGF5 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC17.11■□□□□ 0.33
Tmem56Q8CGF5 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Tmem56Q8CGF5 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tmem56Q8CGF5 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tmem56Q8CGF5 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Tmem56Q8CGF5 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tmem56Q8CGF5 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tmem56Q8CGF5 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tmem56Q8CGF5 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tmem56Q8CGF5 AC152827.1-201ENSMUST00000221143 2189 ntBASIC17.11■□□□□ 0.33
Tmem56Q8CGF5 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Tmem56Q8CGF5 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Tmem56Q8CGF5 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tmem56Q8CGF5 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC17.1■□□□□ 0.33
Tmem56Q8CGF5 Gm12922-201ENSMUST00000120626 809 ntBASIC17.1■□□□□ 0.33
Tmem56Q8CGF5 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Tmem56Q8CGF5 Gm43759-201ENSMUST00000196925 1261 ntBASIC17.1■□□□□ 0.33
Tmem56Q8CGF5 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Tmem56Q8CGF5 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tmem56Q8CGF5 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tmem56Q8CGF5 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Tmem56Q8CGF5 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tmem56Q8CGF5 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC17.09■□□□□ 0.33
Tmem56Q8CGF5 Krt8-ps-201ENSMUST00000208495 945 ntBASIC17.09■□□□□ 0.33
Tmem56Q8CGF5 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tmem56Q8CGF5 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Tmem56Q8CGF5 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tmem56Q8CGF5 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tmem56Q8CGF5 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tmem56Q8CGF5 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Tmem56Q8CGF5 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Tmem56Q8CGF5 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
Tmem56Q8CGF5 Snhg20-203ENSMUST00000182811 2153 ntBASIC17.08■□□□□ 0.33
Tmem56Q8CGF5 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Tmem56Q8CGF5 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Tmem56Q8CGF5 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Tmem56Q8CGF5 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tmem56Q8CGF5 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tmem56Q8CGF5 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC17.08■□□□□ 0.32
Tmem56Q8CGF5 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC17.08■□□□□ 0.32
Tmem56Q8CGF5 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC17.08■□□□□ 0.32
Tmem56Q8CGF5 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tmem56Q8CGF5 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Tmem56Q8CGF5 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Tmem56Q8CGF5 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tmem56Q8CGF5 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tmem56Q8CGF5 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tmem56Q8CGF5 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tmem56Q8CGF5 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Tmem56Q8CGF5 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Tmem56Q8CGF5 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tmem56Q8CGF5 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tmem56Q8CGF5 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tmem56Q8CGF5 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tmem56Q8CGF5 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tmem56Q8CGF5 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms