Protein–RNA interactions for Protein: Q8CDY9

Pcdhb7, Protocadherin beta 7, mousemouse

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb7Q8CDY9 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhb7Q8CDY9 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdhb7Q8CDY9 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdhb7Q8CDY9 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdhb7Q8CDY9 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdhb7Q8CDY9 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Pcdhb7Q8CDY9 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Pcdhb7Q8CDY9 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdhb7Q8CDY9 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdhb7Q8CDY9 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdhb7Q8CDY9 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdhb7Q8CDY9 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdhb7Q8CDY9 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC20.01■□□□□ 0.79
Pcdhb7Q8CDY9 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdhb7Q8CDY9 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Pcdhb7Q8CDY9 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
Pcdhb7Q8CDY9 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdhb7Q8CDY9 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdhb7Q8CDY9 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdhb7Q8CDY9 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Pcdhb7Q8CDY9 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdhb7Q8CDY9 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC20■□□□□ 0.79
Pcdhb7Q8CDY9 Gm45102-201ENSMUST00000207427 857 ntBASIC20■□□□□ 0.79
Pcdhb7Q8CDY9 Gm7143-201ENSMUST00000222811 859 ntBASIC20■□□□□ 0.79
Pcdhb7Q8CDY9 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdhb7Q8CDY9 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdhb7Q8CDY9 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdhb7Q8CDY9 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Pcdhb7Q8CDY9 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdhb7Q8CDY9 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdhb7Q8CDY9 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdhb7Q8CDY9 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdhb7Q8CDY9 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Pcdhb7Q8CDY9 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdhb7Q8CDY9 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.99■□□□□ 0.79
Pcdhb7Q8CDY9 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdhb7Q8CDY9 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC19.99■□□□□ 0.79
Pcdhb7Q8CDY9 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Pcdhb7Q8CDY9 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdhb7Q8CDY9 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdhb7Q8CDY9 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdhb7Q8CDY9 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdhb7Q8CDY9 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdhb7Q8CDY9 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdhb7Q8CDY9 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdhb7Q8CDY9 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.98■□□□□ 0.79
Pcdhb7Q8CDY9 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC19.98■□□□□ 0.79
Pcdhb7Q8CDY9 Gm14117-201ENSMUST00000122417 843 ntBASIC19.98■□□□□ 0.79
Pcdhb7Q8CDY9 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdhb7Q8CDY9 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Pcdhb7Q8CDY9 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
Pcdhb7Q8CDY9 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdhb7Q8CDY9 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Pcdhb7Q8CDY9 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Pcdhb7Q8CDY9 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdhb7Q8CDY9 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Pcdhb7Q8CDY9 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Pcdhb7Q8CDY9 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC19.97■□□□□ 0.79
Pcdhb7Q8CDY9 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Pcdhb7Q8CDY9 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdhb7Q8CDY9 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdhb7Q8CDY9 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdhb7Q8CDY9 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdhb7Q8CDY9 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdhb7Q8CDY9 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.97■□□□□ 0.79
Pcdhb7Q8CDY9 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdhb7Q8CDY9 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdhb7Q8CDY9 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Pcdhb7Q8CDY9 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC19.96■□□□□ 0.79
Pcdhb7Q8CDY9 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC19.96■□□□□ 0.79
Pcdhb7Q8CDY9 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Pcdhb7Q8CDY9 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Pcdhb7Q8CDY9 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Pcdhb7Q8CDY9 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Pcdhb7Q8CDY9 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Pcdhb7Q8CDY9 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Pcdhb7Q8CDY9 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Pcdhb7Q8CDY9 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Pcdhb7Q8CDY9 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Pcdhb7Q8CDY9 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pcdhb7Q8CDY9 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Pcdhb7Q8CDY9 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pcdhb7Q8CDY9 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pcdhb7Q8CDY9 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pcdhb7Q8CDY9 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.94■□□□□ 0.78
Pcdhb7Q8CDY9 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19.94■□□□□ 0.78
Pcdhb7Q8CDY9 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.94■□□□□ 0.78
Pcdhb7Q8CDY9 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC19.93■□□□□ 0.78
Pcdhb7Q8CDY9 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Pcdhb7Q8CDY9 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Pcdhb7Q8CDY9 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Pcdhb7Q8CDY9 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Pcdhb7Q8CDY9 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.93■□□□□ 0.78
Pcdhb7Q8CDY9 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Pcdhb7Q8CDY9 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Pcdhb7Q8CDY9 Gm9870-201ENSMUST00000063874 645 ntBASIC19.93■□□□□ 0.78
Pcdhb7Q8CDY9 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Pcdhb7Q8CDY9 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Pcdhb7Q8CDY9 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Pcdhb7Q8CDY9 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms