Protein–RNA interactions for Protein: Q8C2E4

Ptcd1, Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

Known RBP Predictions only

Length 695 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1Q8C2E4 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC24.75■■□□□ 1.55
Ptcd1Q8C2E4 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC24.75■■□□□ 1.55
Ptcd1Q8C2E4 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC24.74■■□□□ 1.55
Ptcd1Q8C2E4 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Ptcd1Q8C2E4 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
Ptcd1Q8C2E4 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC24.74■■□□□ 1.55
Ptcd1Q8C2E4 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC24.74■■□□□ 1.55
Ptcd1Q8C2E4 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC24.74■■□□□ 1.55
Ptcd1Q8C2E4 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC24.74■■□□□ 1.55
Ptcd1Q8C2E4 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Ptcd1Q8C2E4 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
Ptcd1Q8C2E4 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
Ptcd1Q8C2E4 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC24.74■■□□□ 1.55
Ptcd1Q8C2E4 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Ptcd1Q8C2E4 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Ptcd1Q8C2E4 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
Ptcd1Q8C2E4 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC24.74■■□□□ 1.55
Ptcd1Q8C2E4 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Ptcd1Q8C2E4 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC24.73■■□□□ 1.55
Ptcd1Q8C2E4 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC24.73■■□□□ 1.55
Ptcd1Q8C2E4 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC24.73■■□□□ 1.55
Ptcd1Q8C2E4 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC24.73■■□□□ 1.55
Ptcd1Q8C2E4 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC24.73■■□□□ 1.55
Ptcd1Q8C2E4 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Ptcd1Q8C2E4 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
Ptcd1Q8C2E4 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
Ptcd1Q8C2E4 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC24.72■■□□□ 1.55
Ptcd1Q8C2E4 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC24.72■■□□□ 1.55
Ptcd1Q8C2E4 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC24.72■■□□□ 1.55
Ptcd1Q8C2E4 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC24.72■■□□□ 1.55
Ptcd1Q8C2E4 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Ptcd1Q8C2E4 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC24.72■■□□□ 1.55
Ptcd1Q8C2E4 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Ptcd1Q8C2E4 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC24.72■■□□□ 1.55
Ptcd1Q8C2E4 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC24.72■■□□□ 1.55
Ptcd1Q8C2E4 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC24.71■■□□□ 1.55
Ptcd1Q8C2E4 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC24.71■■□□□ 1.55
Ptcd1Q8C2E4 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC24.71■■□□□ 1.55
Ptcd1Q8C2E4 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Ptcd1Q8C2E4 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Ptcd1Q8C2E4 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC24.71■■□□□ 1.55
Ptcd1Q8C2E4 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC24.71■■□□□ 1.55
Ptcd1Q8C2E4 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC24.7■■□□□ 1.55
Ptcd1Q8C2E4 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Ptcd1Q8C2E4 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Ptcd1Q8C2E4 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Ptcd1Q8C2E4 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Ptcd1Q8C2E4 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Ptcd1Q8C2E4 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Ptcd1Q8C2E4 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Ptcd1Q8C2E4 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC24.69■■□□□ 1.54
Ptcd1Q8C2E4 Gm12933-201ENSMUST00000120203 872 ntBASIC24.69■■□□□ 1.54
Ptcd1Q8C2E4 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC24.69■■□□□ 1.54
Ptcd1Q8C2E4 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC24.69■■□□□ 1.54
Ptcd1Q8C2E4 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC24.69■■□□□ 1.54
Ptcd1Q8C2E4 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
Ptcd1Q8C2E4 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Ptcd1Q8C2E4 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Ptcd1Q8C2E4 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Ptcd1Q8C2E4 Gm11421-201ENSMUST00000122124 294 ntBASIC24.68■■□□□ 1.54
Ptcd1Q8C2E4 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
Ptcd1Q8C2E4 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
Ptcd1Q8C2E4 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
Ptcd1Q8C2E4 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
Ptcd1Q8C2E4 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
Ptcd1Q8C2E4 Gm12504-201ENSMUST00000120860 2231 ntBASIC24.67■■□□□ 1.54
Ptcd1Q8C2E4 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
Ptcd1Q8C2E4 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Ptcd1Q8C2E4 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC24.67■■□□□ 1.54
Ptcd1Q8C2E4 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Ptcd1Q8C2E4 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC24.67■■□□□ 1.54
Ptcd1Q8C2E4 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
Ptcd1Q8C2E4 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Ptcd1Q8C2E4 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC24.66■■□□□ 1.54
Ptcd1Q8C2E4 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC24.66■■□□□ 1.54
Ptcd1Q8C2E4 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC24.66■■□□□ 1.54
Ptcd1Q8C2E4 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC24.66■■□□□ 1.54
Ptcd1Q8C2E4 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Ptcd1Q8C2E4 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
Ptcd1Q8C2E4 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC24.65■■□□□ 1.54
Ptcd1Q8C2E4 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC24.65■■□□□ 1.54
Ptcd1Q8C2E4 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC24.65■■□□□ 1.54
Ptcd1Q8C2E4 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC24.65■■□□□ 1.54
Ptcd1Q8C2E4 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
Ptcd1Q8C2E4 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC24.65■■□□□ 1.54
Ptcd1Q8C2E4 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC24.65■■□□□ 1.54
Ptcd1Q8C2E4 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC24.64■■□□□ 1.54
Ptcd1Q8C2E4 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.53
Ptcd1Q8C2E4 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC24.63■■□□□ 1.53
Ptcd1Q8C2E4 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Ptcd1Q8C2E4 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
Ptcd1Q8C2E4 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC24.63■■□□□ 1.53
Ptcd1Q8C2E4 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Ptcd1Q8C2E4 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
Ptcd1Q8C2E4 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
Ptcd1Q8C2E4 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC24.62■■□□□ 1.53
Ptcd1Q8C2E4 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC24.62■■□□□ 1.53
Ptcd1Q8C2E4 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Ptcd1Q8C2E4 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
Ptcd1Q8C2E4 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms