Protein–RNA interactions for Protein: Q8BWU1

Sprn, Shadow of prion protein, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SprnQ8BWU1 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SprnQ8BWU1 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SprnQ8BWU1 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
SprnQ8BWU1 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SprnQ8BWU1 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SprnQ8BWU1 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SprnQ8BWU1 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
SprnQ8BWU1 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
SprnQ8BWU1 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SprnQ8BWU1 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
SprnQ8BWU1 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC17.73■□□□□ 0.43
SprnQ8BWU1 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SprnQ8BWU1 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SprnQ8BWU1 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SprnQ8BWU1 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SprnQ8BWU1 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SprnQ8BWU1 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SprnQ8BWU1 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
SprnQ8BWU1 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SprnQ8BWU1 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SprnQ8BWU1 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SprnQ8BWU1 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
SprnQ8BWU1 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SprnQ8BWU1 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
SprnQ8BWU1 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SprnQ8BWU1 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC17.72■□□□□ 0.43
SprnQ8BWU1 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC17.72■□□□□ 0.43
SprnQ8BWU1 Gm5522-201ENSMUST00000189483 1242 ntBASIC17.72■□□□□ 0.43
SprnQ8BWU1 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC17.72■□□□□ 0.43
SprnQ8BWU1 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SprnQ8BWU1 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SprnQ8BWU1 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SprnQ8BWU1 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SprnQ8BWU1 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.72■□□□□ 0.43
SprnQ8BWU1 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SprnQ8BWU1 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SprnQ8BWU1 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
SprnQ8BWU1 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SprnQ8BWU1 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SprnQ8BWU1 Gm11847-201ENSMUST00000125165 1119 ntBASIC17.71■□□□□ 0.43
SprnQ8BWU1 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC17.71■□□□□ 0.43
SprnQ8BWU1 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
SprnQ8BWU1 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SprnQ8BWU1 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
SprnQ8BWU1 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SprnQ8BWU1 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
SprnQ8BWU1 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
SprnQ8BWU1 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
SprnQ8BWU1 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SprnQ8BWU1 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SprnQ8BWU1 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.7■□□□□ 0.42
SprnQ8BWU1 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
SprnQ8BWU1 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC17.69■□□□□ 0.42
SprnQ8BWU1 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SprnQ8BWU1 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
SprnQ8BWU1 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SprnQ8BWU1 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SprnQ8BWU1 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
SprnQ8BWU1 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SprnQ8BWU1 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
SprnQ8BWU1 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SprnQ8BWU1 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SprnQ8BWU1 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SprnQ8BWU1 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
SprnQ8BWU1 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SprnQ8BWU1 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SprnQ8BWU1 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
SprnQ8BWU1 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SprnQ8BWU1 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SprnQ8BWU1 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SprnQ8BWU1 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
SprnQ8BWU1 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SprnQ8BWU1 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
SprnQ8BWU1 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SprnQ8BWU1 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
SprnQ8BWU1 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SprnQ8BWU1 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
SprnQ8BWU1 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SprnQ8BWU1 Gm6802-201ENSMUST00000167843 1983 ntBASIC17.66■□□□□ 0.42
SprnQ8BWU1 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SprnQ8BWU1 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
SprnQ8BWU1 Gm43566-201ENSMUST00000196851 808 ntBASIC17.66■□□□□ 0.42
SprnQ8BWU1 Gm15820-201ENSMUST00000201566 728 ntBASIC17.66■□□□□ 0.42
SprnQ8BWU1 Gm45444-201ENSMUST00000211394 898 ntBASIC17.66■□□□□ 0.42
SprnQ8BWU1 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC17.66■□□□□ 0.42
SprnQ8BWU1 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SprnQ8BWU1 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SprnQ8BWU1 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SprnQ8BWU1 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SprnQ8BWU1 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
SprnQ8BWU1 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SprnQ8BWU1 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
SprnQ8BWU1 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SprnQ8BWU1 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
SprnQ8BWU1 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
SprnQ8BWU1 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
SprnQ8BWU1 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
SprnQ8BWU1 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.42
SprnQ8BWU1 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
SprnQ8BWU1 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC17.64■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms