Protein–RNA interactions for Protein: Q8BM39

Prpf18, Pre-mRNA-splicing factor 18, mousemouse

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf18Q8BM39 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Prpf18Q8BM39 Gm11847-201ENSMUST00000125165 1119 ntBASIC18.94■□□□□ 0.62
Prpf18Q8BM39 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Prpf18Q8BM39 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC18.94■□□□□ 0.62
Prpf18Q8BM39 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Prpf18Q8BM39 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Prpf18Q8BM39 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Prpf18Q8BM39 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Prpf18Q8BM39 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Prpf18Q8BM39 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Prpf18Q8BM39 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Prpf18Q8BM39 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Prpf18Q8BM39 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Prpf18Q8BM39 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Prpf18Q8BM39 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Prpf18Q8BM39 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Prpf18Q8BM39 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Prpf18Q8BM39 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC18.93■□□□□ 0.62
Prpf18Q8BM39 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Prpf18Q8BM39 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Prpf18Q8BM39 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Prpf18Q8BM39 Gm28536-201ENSMUST00000190971 1317 ntBASIC18.93■□□□□ 0.62
Prpf18Q8BM39 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Prpf18Q8BM39 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Prpf18Q8BM39 AC122428.2-201ENSMUST00000216321 1832 ntBASIC18.93■□□□□ 0.62
Prpf18Q8BM39 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Prpf18Q8BM39 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC18.92■□□□□ 0.62
Prpf18Q8BM39 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Prpf18Q8BM39 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Prpf18Q8BM39 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Prpf18Q8BM39 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Prpf18Q8BM39 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.92■□□□□ 0.62
Prpf18Q8BM39 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Prpf18Q8BM39 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Prpf18Q8BM39 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.92■□□□□ 0.62
Prpf18Q8BM39 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Prpf18Q8BM39 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Prpf18Q8BM39 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC18.91■□□□□ 0.62
Prpf18Q8BM39 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC18.91■□□□□ 0.62
Prpf18Q8BM39 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Prpf18Q8BM39 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Prpf18Q8BM39 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Prpf18Q8BM39 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Prpf18Q8BM39 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Prpf18Q8BM39 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18.91■□□□□ 0.62
Prpf18Q8BM39 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Prpf18Q8BM39 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Prpf18Q8BM39 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Prpf18Q8BM39 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Prpf18Q8BM39 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Prpf18Q8BM39 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Prpf18Q8BM39 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Prpf18Q8BM39 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC18.9■□□□□ 0.62
Prpf18Q8BM39 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Prpf18Q8BM39 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Prpf18Q8BM39 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Prpf18Q8BM39 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Prpf18Q8BM39 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Prpf18Q8BM39 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Prpf18Q8BM39 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Prpf18Q8BM39 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Prpf18Q8BM39 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.9■□□□□ 0.62
Prpf18Q8BM39 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Prpf18Q8BM39 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Prpf18Q8BM39 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Prpf18Q8BM39 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Prpf18Q8BM39 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Prpf18Q8BM39 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Prpf18Q8BM39 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Prpf18Q8BM39 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Prpf18Q8BM39 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Prpf18Q8BM39 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Prpf18Q8BM39 Nsd1-203ENSMUST00000224156 1149 ntBASIC18.89■□□□□ 0.61
Prpf18Q8BM39 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Prpf18Q8BM39 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Prpf18Q8BM39 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Prpf18Q8BM39 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Prpf18Q8BM39 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Prpf18Q8BM39 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Prpf18Q8BM39 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Prpf18Q8BM39 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Prpf18Q8BM39 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Prpf18Q8BM39 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Prpf18Q8BM39 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Prpf18Q8BM39 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Prpf18Q8BM39 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Prpf18Q8BM39 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Prpf18Q8BM39 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Prpf18Q8BM39 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.88■□□□□ 0.61
Prpf18Q8BM39 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Prpf18Q8BM39 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Prpf18Q8BM39 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Prpf18Q8BM39 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Prpf18Q8BM39 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Prpf18Q8BM39 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Prpf18Q8BM39 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC18.87■□□□□ 0.61
Prpf18Q8BM39 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
Prpf18Q8BM39 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Prpf18Q8BM39 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Prpf18Q8BM39 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms