Protein–RNA interactions for Protein: Q8BIZ0

Pcdh20, Protocadherin-20, mousemouse

Predictions only

Length 952 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20Q8BIZ0 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdh20Q8BIZ0 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19.47■□□□□ 0.71
Pcdh20Q8BIZ0 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdh20Q8BIZ0 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Pcdh20Q8BIZ0 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Pcdh20Q8BIZ0 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdh20Q8BIZ0 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdh20Q8BIZ0 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC19.46■□□□□ 0.71
Pcdh20Q8BIZ0 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdh20Q8BIZ0 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdh20Q8BIZ0 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Pcdh20Q8BIZ0 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdh20Q8BIZ0 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdh20Q8BIZ0 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Pcdh20Q8BIZ0 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdh20Q8BIZ0 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Pcdh20Q8BIZ0 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdh20Q8BIZ0 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdh20Q8BIZ0 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdh20Q8BIZ0 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdh20Q8BIZ0 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdh20Q8BIZ0 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.45■□□□□ 0.7
Pcdh20Q8BIZ0 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdh20Q8BIZ0 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdh20Q8BIZ0 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdh20Q8BIZ0 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdh20Q8BIZ0 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdh20Q8BIZ0 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Pcdh20Q8BIZ0 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC19.44■□□□□ 0.7
Pcdh20Q8BIZ0 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdh20Q8BIZ0 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdh20Q8BIZ0 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Pcdh20Q8BIZ0 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Pcdh20Q8BIZ0 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdh20Q8BIZ0 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdh20Q8BIZ0 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdh20Q8BIZ0 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Pcdh20Q8BIZ0 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdh20Q8BIZ0 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdh20Q8BIZ0 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdh20Q8BIZ0 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdh20Q8BIZ0 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdh20Q8BIZ0 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdh20Q8BIZ0 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdh20Q8BIZ0 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdh20Q8BIZ0 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdh20Q8BIZ0 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.42■□□□□ 0.7
Pcdh20Q8BIZ0 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdh20Q8BIZ0 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.42■□□□□ 0.7
Pcdh20Q8BIZ0 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdh20Q8BIZ0 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdh20Q8BIZ0 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdh20Q8BIZ0 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdh20Q8BIZ0 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.41■□□□□ 0.7
Pcdh20Q8BIZ0 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdh20Q8BIZ0 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdh20Q8BIZ0 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC19.41■□□□□ 0.7
Pcdh20Q8BIZ0 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdh20Q8BIZ0 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdh20Q8BIZ0 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Pcdh20Q8BIZ0 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdh20Q8BIZ0 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdh20Q8BIZ0 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdh20Q8BIZ0 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdh20Q8BIZ0 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdh20Q8BIZ0 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdh20Q8BIZ0 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdh20Q8BIZ0 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC19.4■□□□□ 0.7
Pcdh20Q8BIZ0 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdh20Q8BIZ0 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdh20Q8BIZ0 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdh20Q8BIZ0 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdh20Q8BIZ0 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Pcdh20Q8BIZ0 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdh20Q8BIZ0 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdh20Q8BIZ0 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdh20Q8BIZ0 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdh20Q8BIZ0 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdh20Q8BIZ0 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdh20Q8BIZ0 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Pcdh20Q8BIZ0 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdh20Q8BIZ0 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdh20Q8BIZ0 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdh20Q8BIZ0 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdh20Q8BIZ0 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdh20Q8BIZ0 Gm43545-201ENSMUST00000196765 2779 ntBASIC19.38■□□□□ 0.69
Pcdh20Q8BIZ0 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Pcdh20Q8BIZ0 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Pcdh20Q8BIZ0 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdh20Q8BIZ0 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdh20Q8BIZ0 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdh20Q8BIZ0 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Pcdh20Q8BIZ0 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdh20Q8BIZ0 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdh20Q8BIZ0 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdh20Q8BIZ0 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdh20Q8BIZ0 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdh20Q8BIZ0 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdh20Q8BIZ0 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
Pcdh20Q8BIZ0 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms