Protein–RNA interactions for Protein: Q8BGX0

Trim23, E3 ubiquitin-protein ligase TRIM23, mousemouse

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23Q8BGX0 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trim23Q8BGX0 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Trim23Q8BGX0 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Trim23Q8BGX0 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Trim23Q8BGX0 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC19.33■□□□□ 0.68
Trim23Q8BGX0 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trim23Q8BGX0 AC124392.1-201ENSMUST00000225172 5324 ntBASIC19.33■□□□□ 0.68
Trim23Q8BGX0 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trim23Q8BGX0 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim23Q8BGX0 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Trim23Q8BGX0 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim23Q8BGX0 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim23Q8BGX0 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Trim23Q8BGX0 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim23Q8BGX0 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim23Q8BGX0 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Trim23Q8BGX0 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Trim23Q8BGX0 Gm6085-201ENSMUST00000182774 1470 ntBASIC19.32■□□□□ 0.68
Trim23Q8BGX0 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Trim23Q8BGX0 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim23Q8BGX0 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Trim23Q8BGX0 Mir7075-201ENSMUST00000184187 82 ntBASIC19.31■□□□□ 0.68
Trim23Q8BGX0 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Trim23Q8BGX0 Gm6139-201ENSMUST00000079261 882 ntBASIC19.31■□□□□ 0.68
Trim23Q8BGX0 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim23Q8BGX0 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim23Q8BGX0 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Trim23Q8BGX0 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim23Q8BGX0 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Trim23Q8BGX0 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim23Q8BGX0 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim23Q8BGX0 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Trim23Q8BGX0 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim23Q8BGX0 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Trim23Q8BGX0 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim23Q8BGX0 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim23Q8BGX0 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim23Q8BGX0 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim23Q8BGX0 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Trim23Q8BGX0 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Trim23Q8BGX0 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Trim23Q8BGX0 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim23Q8BGX0 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC19.29■□□□□ 0.68
Trim23Q8BGX0 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
Trim23Q8BGX0 Wdr70-203ENSMUST00000227371 1130 ntBASIC19.29■□□□□ 0.68
Trim23Q8BGX0 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Trim23Q8BGX0 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC19.29■□□□□ 0.68
Trim23Q8BGX0 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Trim23Q8BGX0 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC19.29■□□□□ 0.68
Trim23Q8BGX0 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim23Q8BGX0 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim23Q8BGX0 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim23Q8BGX0 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim23Q8BGX0 Hsf1-207ENSMUST00000228371 2102 ntBASIC19.28■□□□□ 0.68
Trim23Q8BGX0 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
Trim23Q8BGX0 Gm12251-201ENSMUST00000117893 792 ntBASIC19.28■□□□□ 0.68
Trim23Q8BGX0 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Trim23Q8BGX0 Spcs1-204ENSMUST00000226782 949 ntBASIC19.28■□□□□ 0.68
Trim23Q8BGX0 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Trim23Q8BGX0 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim23Q8BGX0 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim23Q8BGX0 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Trim23Q8BGX0 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC19.27■□□□□ 0.68
Trim23Q8BGX0 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim23Q8BGX0 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Trim23Q8BGX0 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim23Q8BGX0 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim23Q8BGX0 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC19.27■□□□□ 0.68
Trim23Q8BGX0 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim23Q8BGX0 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim23Q8BGX0 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Trim23Q8BGX0 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.67
Trim23Q8BGX0 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Trim23Q8BGX0 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
Trim23Q8BGX0 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Trim23Q8BGX0 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim23Q8BGX0 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim23Q8BGX0 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim23Q8BGX0 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
Trim23Q8BGX0 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim23Q8BGX0 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim23Q8BGX0 Gm7160-202ENSMUST00000188519 1027 ntBASIC19.26■□□□□ 0.67
Trim23Q8BGX0 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim23Q8BGX0 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Trim23Q8BGX0 Gm10209-201ENSMUST00000203397 1607 ntBASIC19.25■□□□□ 0.67
Trim23Q8BGX0 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim23Q8BGX0 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim23Q8BGX0 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim23Q8BGX0 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim23Q8BGX0 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim23Q8BGX0 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
Trim23Q8BGX0 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Trim23Q8BGX0 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim23Q8BGX0 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Trim23Q8BGX0 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Trim23Q8BGX0 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC19.24■□□□□ 0.67
Trim23Q8BGX0 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Trim23Q8BGX0 Gm43173-201ENSMUST00000202246 593 ntBASIC19.24■□□□□ 0.67
Trim23Q8BGX0 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Trim23Q8BGX0 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 119.3 ms