Protein–RNA interactions for Protein: Q811W0

Sox21, Transcription factor SOX-21, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox21Q811W0 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC16.32■□□□□ 0.2
Sox21Q811W0 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sox21Q811W0 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sox21Q811W0 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sox21Q811W0 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sox21Q811W0 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Sox21Q811W0 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sox21Q811W0 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
Sox21Q811W0 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Sox21Q811W0 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sox21Q811W0 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC16.31■□□□□ 0.2
Sox21Q811W0 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sox21Q811W0 AC166356.1-201ENSMUST00000228236 1426 ntBASIC16.31■□□□□ 0.2
Sox21Q811W0 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC16.31■□□□□ 0.2
Sox21Q811W0 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Sox21Q811W0 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sox21Q811W0 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Sox21Q811W0 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC16.31■□□□□ 0.2
Sox21Q811W0 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Sox21Q811W0 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sox21Q811W0 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Sox21Q811W0 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Sox21Q811W0 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Sox21Q811W0 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sox21Q811W0 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Sox21Q811W0 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Sox21Q811W0 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
Sox21Q811W0 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sox21Q811W0 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
Sox21Q811W0 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sox21Q811W0 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Sox21Q811W0 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Sox21Q811W0 Gm5576-201ENSMUST00000075809 1236 ntBASIC16.3■□□□□ 0.2
Sox21Q811W0 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Sox21Q811W0 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sox21Q811W0 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sox21Q811W0 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sox21Q811W0 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Sox21Q811W0 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sox21Q811W0 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sox21Q811W0 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Sox21Q811W0 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sox21Q811W0 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
Sox21Q811W0 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC16.29■□□□□ 0.2
Sox21Q811W0 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC16.29■□□□□ 0.2
Sox21Q811W0 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Sox21Q811W0 Gm15043-201ENSMUST00000118843 1543 ntBASIC16.29■□□□□ 0.2
Sox21Q811W0 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Sox21Q811W0 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sox21Q811W0 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
Sox21Q811W0 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Sox21Q811W0 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC16.28■□□□□ 0.2
Sox21Q811W0 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sox21Q811W0 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sox21Q811W0 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Sox21Q811W0 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Sox21Q811W0 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC16.28■□□□□ 0.2
Sox21Q811W0 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC16.28■□□□□ 0.2
Sox21Q811W0 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sox21Q811W0 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC16.28■□□□□ 0.2
Sox21Q811W0 Gm43530-201ENSMUST00000195920 274 ntBASIC16.28■□□□□ 0.2
Sox21Q811W0 Gm21168-201ENSMUST00000199646 1096 ntBASIC16.28■□□□□ 0.2
Sox21Q811W0 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sox21Q811W0 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
Sox21Q811W0 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC16.28■□□□□ 0.2
Sox21Q811W0 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sox21Q811W0 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sox21Q811W0 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Sox21Q811W0 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Sox21Q811W0 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sox21Q811W0 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sox21Q811W0 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sox21Q811W0 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC16.27■□□□□ 0.2
Sox21Q811W0 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sox21Q811W0 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sox21Q811W0 Gm43173-201ENSMUST00000202246 593 ntBASIC16.27■□□□□ 0.2
Sox21Q811W0 Wdr70-203ENSMUST00000227371 1130 ntBASIC16.27■□□□□ 0.2
Sox21Q811W0 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sox21Q811W0 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sox21Q811W0 Gm43403-201ENSMUST00000198011 1786 ntBASIC16.27■□□□□ 0.2
Sox21Q811W0 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Sox21Q811W0 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.19
Sox21Q811W0 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Sox21Q811W0 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Sox21Q811W0 Gm6085-201ENSMUST00000182774 1470 ntBASIC16.27■□□□□ 0.19
Sox21Q811W0 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Sox21Q811W0 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Sox21Q811W0 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sox21Q811W0 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC16.26■□□□□ 0.19
Sox21Q811W0 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sox21Q811W0 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sox21Q811W0 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sox21Q811W0 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sox21Q811W0 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sox21Q811W0 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
Sox21Q811W0 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC16.25■□□□□ 0.19
Sox21Q811W0 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sox21Q811W0 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sox21Q811W0 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sox21Q811W0 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms