Protein–RNA interactions for Protein: Q80YF6

Upk3b, Uroplakin-3b, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bQ80YF6 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
Upk3bQ80YF6 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Upk3bQ80YF6 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Upk3bQ80YF6 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Upk3bQ80YF6 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC16.91■□□□□ 0.3
Upk3bQ80YF6 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC16.91■□□□□ 0.3
Upk3bQ80YF6 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Upk3bQ80YF6 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Upk3bQ80YF6 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Upk3bQ80YF6 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Upk3bQ80YF6 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Upk3bQ80YF6 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Upk3bQ80YF6 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Upk3bQ80YF6 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Upk3bQ80YF6 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Upk3bQ80YF6 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Upk3bQ80YF6 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC16.91■□□□□ 0.3
Upk3bQ80YF6 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Upk3bQ80YF6 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Upk3bQ80YF6 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Upk3bQ80YF6 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Upk3bQ80YF6 Gm16464-201ENSMUST00000117815 1095 ntBASIC16.9■□□□□ 0.3
Upk3bQ80YF6 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Upk3bQ80YF6 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Upk3bQ80YF6 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Upk3bQ80YF6 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Upk3bQ80YF6 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Upk3bQ80YF6 Iqck-206ENSMUST00000208658 2891 ntBASIC16.9■□□□□ 0.3
Upk3bQ80YF6 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Upk3bQ80YF6 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Upk3bQ80YF6 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Upk3bQ80YF6 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Upk3bQ80YF6 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
Upk3bQ80YF6 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Upk3bQ80YF6 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC16.89■□□□□ 0.29
Upk3bQ80YF6 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
Upk3bQ80YF6 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Upk3bQ80YF6 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Upk3bQ80YF6 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Upk3bQ80YF6 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Upk3bQ80YF6 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Upk3bQ80YF6 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Upk3bQ80YF6 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC16.89■□□□□ 0.29
Upk3bQ80YF6 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Upk3bQ80YF6 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Upk3bQ80YF6 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC16.88■□□□□ 0.29
Upk3bQ80YF6 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Upk3bQ80YF6 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Upk3bQ80YF6 Nsd1-203ENSMUST00000224156 1149 ntBASIC16.88■□□□□ 0.29
Upk3bQ80YF6 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Upk3bQ80YF6 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Upk3bQ80YF6 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Upk3bQ80YF6 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Upk3bQ80YF6 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Upk3bQ80YF6 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Upk3bQ80YF6 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Upk3bQ80YF6 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Upk3bQ80YF6 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Upk3bQ80YF6 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC16.87■□□□□ 0.29
Upk3bQ80YF6 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Upk3bQ80YF6 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Upk3bQ80YF6 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Upk3bQ80YF6 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC16.87■□□□□ 0.29
Upk3bQ80YF6 AC166356.1-201ENSMUST00000228236 1426 ntBASIC16.87■□□□□ 0.29
Upk3bQ80YF6 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Upk3bQ80YF6 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Upk3bQ80YF6 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Upk3bQ80YF6 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Upk3bQ80YF6 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
Upk3bQ80YF6 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Upk3bQ80YF6 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Upk3bQ80YF6 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Upk3bQ80YF6 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Upk3bQ80YF6 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Upk3bQ80YF6 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Upk3bQ80YF6 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Upk3bQ80YF6 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Upk3bQ80YF6 Gm45444-201ENSMUST00000211394 898 ntBASIC16.85■□□□□ 0.29
Upk3bQ80YF6 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Upk3bQ80YF6 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
Upk3bQ80YF6 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Upk3bQ80YF6 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Upk3bQ80YF6 Gm43545-201ENSMUST00000196765 2779 ntBASIC16.84■□□□□ 0.29
Upk3bQ80YF6 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
Upk3bQ80YF6 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Upk3bQ80YF6 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC16.84■□□□□ 0.29
Upk3bQ80YF6 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Upk3bQ80YF6 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Upk3bQ80YF6 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Upk3bQ80YF6 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Upk3bQ80YF6 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Upk3bQ80YF6 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Upk3bQ80YF6 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Upk3bQ80YF6 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Upk3bQ80YF6 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC16.84■□□□□ 0.29
Upk3bQ80YF6 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Upk3bQ80YF6 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Upk3bQ80YF6 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Upk3bQ80YF6 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Upk3bQ80YF6 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC16.84■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms