Protein–RNA interactions for Protein: Q80U87

Usp8, Ubiquitin carboxyl-terminal hydrolase 8, mousemouse

Predictions only

Length 1,080 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp8Q80U87 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Usp8Q80U87 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Usp8Q80U87 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Usp8Q80U87 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Usp8Q80U87 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Usp8Q80U87 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Usp8Q80U87 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC19.95■□□□□ 0.78
Usp8Q80U87 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Usp8Q80U87 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Usp8Q80U87 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Usp8Q80U87 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Usp8Q80U87 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Usp8Q80U87 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Usp8Q80U87 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Usp8Q80U87 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Usp8Q80U87 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Usp8Q80U87 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Usp8Q80U87 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC19.94■□□□□ 0.78
Usp8Q80U87 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC19.94■□□□□ 0.78
Usp8Q80U87 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Usp8Q80U87 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Usp8Q80U87 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Usp8Q80U87 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Usp8Q80U87 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Usp8Q80U87 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Usp8Q80U87 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Usp8Q80U87 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Usp8Q80U87 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Usp8Q80U87 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Usp8Q80U87 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Usp8Q80U87 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Usp8Q80U87 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Usp8Q80U87 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Usp8Q80U87 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Usp8Q80U87 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC19.92■□□□□ 0.78
Usp8Q80U87 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC19.92■□□□□ 0.78
Usp8Q80U87 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
Usp8Q80U87 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Usp8Q80U87 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Usp8Q80U87 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Usp8Q80U87 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Usp8Q80U87 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Usp8Q80U87 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Usp8Q80U87 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Usp8Q80U87 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
Usp8Q80U87 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Usp8Q80U87 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Usp8Q80U87 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Usp8Q80U87 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Usp8Q80U87 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.91■□□□□ 0.78
Usp8Q80U87 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Usp8Q80U87 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Usp8Q80U87 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Usp8Q80U87 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Usp8Q80U87 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Usp8Q80U87 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Usp8Q80U87 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.9■□□□□ 0.78
Usp8Q80U87 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Usp8Q80U87 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Usp8Q80U87 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Usp8Q80U87 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Usp8Q80U87 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Usp8Q80U87 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC19.9■□□□□ 0.78
Usp8Q80U87 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.78
Usp8Q80U87 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Usp8Q80U87 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Usp8Q80U87 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Usp8Q80U87 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Usp8Q80U87 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Usp8Q80U87 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Usp8Q80U87 Gm5522-201ENSMUST00000189483 1242 ntBASIC19.89■□□□□ 0.77
Usp8Q80U87 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Usp8Q80U87 Gm15820-201ENSMUST00000201566 728 ntBASIC19.89■□□□□ 0.77
Usp8Q80U87 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Usp8Q80U87 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Usp8Q80U87 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Usp8Q80U87 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Usp8Q80U87 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Usp8Q80U87 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Usp8Q80U87 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.88■□□□□ 0.77
Usp8Q80U87 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Usp8Q80U87 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC19.88■□□□□ 0.77
Usp8Q80U87 Gm5812-201ENSMUST00000061073 957 ntBASIC19.88■□□□□ 0.77
Usp8Q80U87 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Usp8Q80U87 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Usp8Q80U87 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Usp8Q80U87 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Usp8Q80U87 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Usp8Q80U87 Gm5112-201ENSMUST00000204407 2368 ntBASIC19.87■□□□□ 0.77
Usp8Q80U87 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.87■□□□□ 0.77
Usp8Q80U87 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19.87■□□□□ 0.77
Usp8Q80U87 Gm42501-201ENSMUST00000200220 1026 ntBASIC19.87■□□□□ 0.77
Usp8Q80U87 Gm5131-201ENSMUST00000212776 1238 ntBASIC19.87■□□□□ 0.77
Usp8Q80U87 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Usp8Q80U87 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Usp8Q80U87 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Usp8Q80U87 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Usp8Q80U87 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Usp8Q80U87 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Usp8Q80U87 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms