Protein–RNA interactions for Protein: Q7TQK4

Exosc3, Exosome complex component RRP40, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Exosc3Q7TQK4 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Exosc3Q7TQK4 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Exosc3Q7TQK4 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Exosc3Q7TQK4 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Exosc3Q7TQK4 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC18.43■□□□□ 0.54
Exosc3Q7TQK4 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Exosc3Q7TQK4 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC18.43■□□□□ 0.54
Exosc3Q7TQK4 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC18.43■□□□□ 0.54
Exosc3Q7TQK4 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Exosc3Q7TQK4 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Exosc3Q7TQK4 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Exosc3Q7TQK4 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Exosc3Q7TQK4 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Exosc3Q7TQK4 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Exosc3Q7TQK4 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Exosc3Q7TQK4 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Exosc3Q7TQK4 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Exosc3Q7TQK4 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Exosc3Q7TQK4 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Exosc3Q7TQK4 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Exosc3Q7TQK4 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Exosc3Q7TQK4 Gm37035-201ENSMUST00000194809 2148 ntBASIC18.41■□□□□ 0.54
Exosc3Q7TQK4 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Exosc3Q7TQK4 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Exosc3Q7TQK4 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Exosc3Q7TQK4 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
Exosc3Q7TQK4 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Exosc3Q7TQK4 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Exosc3Q7TQK4 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Exosc3Q7TQK4 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Exosc3Q7TQK4 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Exosc3Q7TQK4 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Exosc3Q7TQK4 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Exosc3Q7TQK4 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC18.4■□□□□ 0.54
Exosc3Q7TQK4 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Exosc3Q7TQK4 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC18.4■□□□□ 0.54
Exosc3Q7TQK4 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC18.4■□□□□ 0.54
Exosc3Q7TQK4 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC18.4■□□□□ 0.54
Exosc3Q7TQK4 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Exosc3Q7TQK4 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Exosc3Q7TQK4 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Exosc3Q7TQK4 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Exosc3Q7TQK4 Gm27045-201ENSMUST00000182145 1402 ntBASIC18.4■□□□□ 0.54
Exosc3Q7TQK4 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Exosc3Q7TQK4 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Exosc3Q7TQK4 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Exosc3Q7TQK4 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Exosc3Q7TQK4 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Exosc3Q7TQK4 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Exosc3Q7TQK4 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC18.39■□□□□ 0.53
Exosc3Q7TQK4 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC18.39■□□□□ 0.53
Exosc3Q7TQK4 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Exosc3Q7TQK4 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC18.39■□□□□ 0.53
Exosc3Q7TQK4 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
Exosc3Q7TQK4 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Exosc3Q7TQK4 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Exosc3Q7TQK4 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Exosc3Q7TQK4 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Exosc3Q7TQK4 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Exosc3Q7TQK4 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
Exosc3Q7TQK4 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Exosc3Q7TQK4 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Exosc3Q7TQK4 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Exosc3Q7TQK4 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Exosc3Q7TQK4 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Exosc3Q7TQK4 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Exosc3Q7TQK4 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Exosc3Q7TQK4 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
Exosc3Q7TQK4 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Exosc3Q7TQK4 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Exosc3Q7TQK4 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Exosc3Q7TQK4 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC18.37■□□□□ 0.53
Exosc3Q7TQK4 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Exosc3Q7TQK4 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Exosc3Q7TQK4 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Exosc3Q7TQK4 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Exosc3Q7TQK4 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
Exosc3Q7TQK4 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Exosc3Q7TQK4 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Exosc3Q7TQK4 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Exosc3Q7TQK4 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Exosc3Q7TQK4 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC18.36■□□□□ 0.53
Exosc3Q7TQK4 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Exosc3Q7TQK4 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Exosc3Q7TQK4 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Exosc3Q7TQK4 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Exosc3Q7TQK4 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC18.35■□□□□ 0.53
Exosc3Q7TQK4 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Exosc3Q7TQK4 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Exosc3Q7TQK4 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Exosc3Q7TQK4 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Exosc3Q7TQK4 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC18.35■□□□□ 0.53
Exosc3Q7TQK4 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Exosc3Q7TQK4 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC18.35■□□□□ 0.53
Exosc3Q7TQK4 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Exosc3Q7TQK4 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Exosc3Q7TQK4 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Exosc3Q7TQK4 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Exosc3Q7TQK4 Hsf1-207ENSMUST00000228371 2102 ntBASIC18.34■□□□□ 0.53
Exosc3Q7TQK4 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18.34■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms