Protein–RNA interactions for Protein: Q7TNK1

Rfx4, Transcription factor RFX4, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx4Q7TNK1 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Rfx4Q7TNK1 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Rfx4Q7TNK1 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rfx4Q7TNK1 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rfx4Q7TNK1 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rfx4Q7TNK1 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC19.16■□□□□ 0.66
Rfx4Q7TNK1 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rfx4Q7TNK1 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rfx4Q7TNK1 Gm28536-201ENSMUST00000190971 1317 ntBASIC19.16■□□□□ 0.66
Rfx4Q7TNK1 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC19.16■□□□□ 0.66
Rfx4Q7TNK1 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rfx4Q7TNK1 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Rfx4Q7TNK1 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rfx4Q7TNK1 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rfx4Q7TNK1 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rfx4Q7TNK1 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Rfx4Q7TNK1 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Rfx4Q7TNK1 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rfx4Q7TNK1 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rfx4Q7TNK1 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rfx4Q7TNK1 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Rfx4Q7TNK1 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Rfx4Q7TNK1 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rfx4Q7TNK1 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Rfx4Q7TNK1 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Rfx4Q7TNK1 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC19.14■□□□□ 0.65
Rfx4Q7TNK1 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rfx4Q7TNK1 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rfx4Q7TNK1 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC19.14■□□□□ 0.65
Rfx4Q7TNK1 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.65
Rfx4Q7TNK1 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rfx4Q7TNK1 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rfx4Q7TNK1 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rfx4Q7TNK1 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rfx4Q7TNK1 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rfx4Q7TNK1 Gm27502-201ENSMUST00000183495 199 ntBASIC19.13■□□□□ 0.65
Rfx4Q7TNK1 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC19.13■□□□□ 0.65
Rfx4Q7TNK1 AC166356.1-201ENSMUST00000228236 1426 ntBASIC19.13■□□□□ 0.65
Rfx4Q7TNK1 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Rfx4Q7TNK1 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC19.13■□□□□ 0.65
Rfx4Q7TNK1 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rfx4Q7TNK1 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rfx4Q7TNK1 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Rfx4Q7TNK1 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rfx4Q7TNK1 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
Rfx4Q7TNK1 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Rfx4Q7TNK1 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Rfx4Q7TNK1 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC19.12■□□□□ 0.65
Rfx4Q7TNK1 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rfx4Q7TNK1 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Rfx4Q7TNK1 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rfx4Q7TNK1 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rfx4Q7TNK1 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rfx4Q7TNK1 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Rfx4Q7TNK1 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Rfx4Q7TNK1 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rfx4Q7TNK1 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rfx4Q7TNK1 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rfx4Q7TNK1 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Rfx4Q7TNK1 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rfx4Q7TNK1 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rfx4Q7TNK1 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rfx4Q7TNK1 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rfx4Q7TNK1 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rfx4Q7TNK1 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC19.1■□□□□ 0.65
Rfx4Q7TNK1 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rfx4Q7TNK1 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rfx4Q7TNK1 Gm14523-201ENSMUST00000117260 558 ntBASIC19.1■□□□□ 0.65
Rfx4Q7TNK1 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Rfx4Q7TNK1 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Rfx4Q7TNK1 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rfx4Q7TNK1 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rfx4Q7TNK1 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rfx4Q7TNK1 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.1■□□□□ 0.65
Rfx4Q7TNK1 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rfx4Q7TNK1 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rfx4Q7TNK1 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Rfx4Q7TNK1 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rfx4Q7TNK1 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rfx4Q7TNK1 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rfx4Q7TNK1 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Rfx4Q7TNK1 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Rfx4Q7TNK1 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rfx4Q7TNK1 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Rfx4Q7TNK1 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rfx4Q7TNK1 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rfx4Q7TNK1 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rfx4Q7TNK1 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Rfx4Q7TNK1 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Rfx4Q7TNK1 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Rfx4Q7TNK1 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
Rfx4Q7TNK1 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Rfx4Q7TNK1 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Rfx4Q7TNK1 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Rfx4Q7TNK1 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Rfx4Q7TNK1 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Rfx4Q7TNK1 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.08■□□□□ 0.64
Rfx4Q7TNK1 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Rfx4Q7TNK1 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Rfx4Q7TNK1 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms