Protein–RNA interactions for Protein: Q7M729

Scn4b, Sodium channel subunit beta-4, mousemouse

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4bQ7M729 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Scn4bQ7M729 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Scn4bQ7M729 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Scn4bQ7M729 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Scn4bQ7M729 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Scn4bQ7M729 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Scn4bQ7M729 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Scn4bQ7M729 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Scn4bQ7M729 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Scn4bQ7M729 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Scn4bQ7M729 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Scn4bQ7M729 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
Scn4bQ7M729 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Scn4bQ7M729 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Scn4bQ7M729 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Scn4bQ7M729 Gm43530-201ENSMUST00000195920 274 ntBASIC19.49■□□□□ 0.71
Scn4bQ7M729 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC19.49■□□□□ 0.71
Scn4bQ7M729 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Scn4bQ7M729 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Scn4bQ7M729 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Scn4bQ7M729 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Scn4bQ7M729 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Scn4bQ7M729 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Scn4bQ7M729 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC19.48■□□□□ 0.71
Scn4bQ7M729 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Scn4bQ7M729 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Scn4bQ7M729 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Scn4bQ7M729 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Scn4bQ7M729 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.71
Scn4bQ7M729 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Scn4bQ7M729 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Scn4bQ7M729 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Scn4bQ7M729 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Scn4bQ7M729 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Scn4bQ7M729 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Scn4bQ7M729 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC19.47■□□□□ 0.71
Scn4bQ7M729 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC19.47■□□□□ 0.71
Scn4bQ7M729 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC19.47■□□□□ 0.71
Scn4bQ7M729 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC19.47■□□□□ 0.71
Scn4bQ7M729 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Scn4bQ7M729 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Scn4bQ7M729 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Scn4bQ7M729 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Scn4bQ7M729 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Scn4bQ7M729 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Scn4bQ7M729 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Scn4bQ7M729 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Scn4bQ7M729 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Scn4bQ7M729 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC19.46■□□□□ 0.71
Scn4bQ7M729 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC19.46■□□□□ 0.71
Scn4bQ7M729 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Scn4bQ7M729 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Scn4bQ7M729 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Scn4bQ7M729 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Scn4bQ7M729 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Scn4bQ7M729 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Scn4bQ7M729 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Scn4bQ7M729 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC19.45■□□□□ 0.7
Scn4bQ7M729 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC19.45■□□□□ 0.7
Scn4bQ7M729 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Scn4bQ7M729 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.45■□□□□ 0.7
Scn4bQ7M729 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Scn4bQ7M729 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Scn4bQ7M729 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Scn4bQ7M729 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Scn4bQ7M729 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
Scn4bQ7M729 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Scn4bQ7M729 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Scn4bQ7M729 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Scn4bQ7M729 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Scn4bQ7M729 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Scn4bQ7M729 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Scn4bQ7M729 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Scn4bQ7M729 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC19.43■□□□□ 0.7
Scn4bQ7M729 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Scn4bQ7M729 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Scn4bQ7M729 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Scn4bQ7M729 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Scn4bQ7M729 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Scn4bQ7M729 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Scn4bQ7M729 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Scn4bQ7M729 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC19.42■□□□□ 0.7
Scn4bQ7M729 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Scn4bQ7M729 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Scn4bQ7M729 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Scn4bQ7M729 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Scn4bQ7M729 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Scn4bQ7M729 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Scn4bQ7M729 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Scn4bQ7M729 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Scn4bQ7M729 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Scn4bQ7M729 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Scn4bQ7M729 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Scn4bQ7M729 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.41■□□□□ 0.7
Scn4bQ7M729 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Scn4bQ7M729 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC19.41■□□□□ 0.7
Scn4bQ7M729 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Scn4bQ7M729 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Scn4bQ7M729 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Scn4bQ7M729 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms