Protein–RNA interactions for Protein: Q6XAS3

Ssx9, MCG116991, isoform CRA_b, mousemouse

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssx9Q6XAS3 Gm15546-201ENSMUST00000122095 826 ntBASIC19.96■□□□□ 0.79
Ssx9Q6XAS3 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ssx9Q6XAS3 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC19.96■□□□□ 0.79
Ssx9Q6XAS3 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC19.96■□□□□ 0.79
Ssx9Q6XAS3 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ssx9Q6XAS3 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ssx9Q6XAS3 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Ssx9Q6XAS3 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ssx9Q6XAS3 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.79
Ssx9Q6XAS3 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ssx9Q6XAS3 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ssx9Q6XAS3 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Ssx9Q6XAS3 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ssx9Q6XAS3 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC19.95■□□□□ 0.78
Ssx9Q6XAS3 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Ssx9Q6XAS3 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ssx9Q6XAS3 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ssx9Q6XAS3 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ssx9Q6XAS3 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Ssx9Q6XAS3 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ssx9Q6XAS3 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Ssx9Q6XAS3 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ssx9Q6XAS3 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ssx9Q6XAS3 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ssx9Q6XAS3 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Ssx9Q6XAS3 Gm7417-201ENSMUST00000192950 473 ntBASIC19.94■□□□□ 0.78
Ssx9Q6XAS3 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ssx9Q6XAS3 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ssx9Q6XAS3 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ssx9Q6XAS3 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ssx9Q6XAS3 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ssx9Q6XAS3 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ssx9Q6XAS3 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Ssx9Q6XAS3 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ssx9Q6XAS3 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ssx9Q6XAS3 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Ssx9Q6XAS3 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ssx9Q6XAS3 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC19.92■□□□□ 0.78
Ssx9Q6XAS3 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC19.92■□□□□ 0.78
Ssx9Q6XAS3 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC19.92■□□□□ 0.78
Ssx9Q6XAS3 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Ssx9Q6XAS3 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Ssx9Q6XAS3 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ssx9Q6XAS3 Gm9870-201ENSMUST00000063874 645 ntBASIC19.92■□□□□ 0.78
Ssx9Q6XAS3 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ssx9Q6XAS3 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
Ssx9Q6XAS3 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ssx9Q6XAS3 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ssx9Q6XAS3 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ssx9Q6XAS3 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC19.91■□□□□ 0.78
Ssx9Q6XAS3 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ssx9Q6XAS3 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Ssx9Q6XAS3 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC19.9■□□□□ 0.78
Ssx9Q6XAS3 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ssx9Q6XAS3 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ssx9Q6XAS3 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC19.9■□□□□ 0.78
Ssx9Q6XAS3 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
Ssx9Q6XAS3 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ssx9Q6XAS3 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ssx9Q6XAS3 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Ssx9Q6XAS3 Etf1-202ENSMUST00000180351 108 ntBASIC19.89■□□□□ 0.77
Ssx9Q6XAS3 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Ssx9Q6XAS3 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC19.89■□□□□ 0.77
Ssx9Q6XAS3 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ssx9Q6XAS3 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Ssx9Q6XAS3 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Ssx9Q6XAS3 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.89■□□□□ 0.77
Ssx9Q6XAS3 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Ssx9Q6XAS3 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Ssx9Q6XAS3 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ssx9Q6XAS3 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ssx9Q6XAS3 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Ssx9Q6XAS3 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ssx9Q6XAS3 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ssx9Q6XAS3 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ssx9Q6XAS3 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ssx9Q6XAS3 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Ssx9Q6XAS3 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.88■□□□□ 0.77
Ssx9Q6XAS3 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ssx9Q6XAS3 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ssx9Q6XAS3 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ssx9Q6XAS3 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC19.87■□□□□ 0.77
Ssx9Q6XAS3 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ssx9Q6XAS3 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ssx9Q6XAS3 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Ssx9Q6XAS3 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC19.86■□□□□ 0.77
Ssx9Q6XAS3 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ssx9Q6XAS3 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Ssx9Q6XAS3 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Ssx9Q6XAS3 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ssx9Q6XAS3 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC19.86■□□□□ 0.77
Ssx9Q6XAS3 Gm10657-201ENSMUST00000193528 1031 ntBASIC19.86■□□□□ 0.77
Ssx9Q6XAS3 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
Ssx9Q6XAS3 Gm43530-201ENSMUST00000195920 274 ntBASIC19.86■□□□□ 0.77
Ssx9Q6XAS3 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ssx9Q6XAS3 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ssx9Q6XAS3 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ssx9Q6XAS3 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Ssx9Q6XAS3 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ssx9Q6XAS3 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 80.3 ms