Protein–RNA interactions for Protein: Q6PCM1

Kdm3a, Lysine-specific demethylase 3A, mousemouse

Predictions only

Length 1,323 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kdm3aQ6PCM1 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Kdm3aQ6PCM1 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Kdm3aQ6PCM1 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Kdm3aQ6PCM1 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Kdm3aQ6PCM1 Smad6-203ENSMUST00000179458 273 ntBASIC24.29■■□□□ 1.48
Kdm3aQ6PCM1 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC24.29■■□□□ 1.48
Kdm3aQ6PCM1 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Kdm3aQ6PCM1 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC24.28■■□□□ 1.48
Kdm3aQ6PCM1 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Kdm3aQ6PCM1 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
Kdm3aQ6PCM1 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC24.28■■□□□ 1.48
Kdm3aQ6PCM1 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC24.28■■□□□ 1.48
Kdm3aQ6PCM1 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Kdm3aQ6PCM1 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Kdm3aQ6PCM1 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC24.27■■□□□ 1.48
Kdm3aQ6PCM1 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Kdm3aQ6PCM1 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Kdm3aQ6PCM1 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Kdm3aQ6PCM1 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC24.27■■□□□ 1.48
Kdm3aQ6PCM1 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC24.27■■□□□ 1.48
Kdm3aQ6PCM1 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC24.27■■□□□ 1.48
Kdm3aQ6PCM1 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC24.27■■□□□ 1.48
Kdm3aQ6PCM1 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC24.27■■□□□ 1.48
Kdm3aQ6PCM1 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Kdm3aQ6PCM1 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC24.27■■□□□ 1.47
Kdm3aQ6PCM1 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Kdm3aQ6PCM1 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC24.26■■□□□ 1.47
Kdm3aQ6PCM1 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Kdm3aQ6PCM1 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC24.26■■□□□ 1.47
Kdm3aQ6PCM1 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC24.26■■□□□ 1.47
Kdm3aQ6PCM1 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC24.26■■□□□ 1.47
Kdm3aQ6PCM1 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Kdm3aQ6PCM1 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Kdm3aQ6PCM1 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC24.25■■□□□ 1.47
Kdm3aQ6PCM1 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
Kdm3aQ6PCM1 Cdc34b-202ENSMUST00000188741 1252 ntBASIC24.25■■□□□ 1.47
Kdm3aQ6PCM1 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Kdm3aQ6PCM1 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC24.25■■□□□ 1.47
Kdm3aQ6PCM1 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Kdm3aQ6PCM1 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC24.25■■□□□ 1.47
Kdm3aQ6PCM1 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC24.25■■□□□ 1.47
Kdm3aQ6PCM1 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Kdm3aQ6PCM1 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC24.24■■□□□ 1.47
Kdm3aQ6PCM1 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Kdm3aQ6PCM1 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Kdm3aQ6PCM1 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Kdm3aQ6PCM1 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Kdm3aQ6PCM1 AC165080.2-201ENSMUST00000217491 1530 ntBASIC24.23■■□□□ 1.47
Kdm3aQ6PCM1 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Kdm3aQ6PCM1 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Kdm3aQ6PCM1 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC24.23■■□□□ 1.47
Kdm3aQ6PCM1 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Kdm3aQ6PCM1 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC24.23■■□□□ 1.47
Kdm3aQ6PCM1 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
Kdm3aQ6PCM1 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC24.23■■□□□ 1.47
Kdm3aQ6PCM1 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Kdm3aQ6PCM1 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Kdm3aQ6PCM1 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
Kdm3aQ6PCM1 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC24.22■■□□□ 1.47
Kdm3aQ6PCM1 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC24.22■■□□□ 1.47
Kdm3aQ6PCM1 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC24.22■■□□□ 1.47
Kdm3aQ6PCM1 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC24.22■■□□□ 1.47
Kdm3aQ6PCM1 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC24.22■■□□□ 1.47
Kdm3aQ6PCM1 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC24.22■■□□□ 1.47
Kdm3aQ6PCM1 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Kdm3aQ6PCM1 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC24.21■■□□□ 1.47
Kdm3aQ6PCM1 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC24.21■■□□□ 1.47
Kdm3aQ6PCM1 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
Kdm3aQ6PCM1 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Kdm3aQ6PCM1 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
Kdm3aQ6PCM1 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
Kdm3aQ6PCM1 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Kdm3aQ6PCM1 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Kdm3aQ6PCM1 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Kdm3aQ6PCM1 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Kdm3aQ6PCM1 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Kdm3aQ6PCM1 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC24.2■■□□□ 1.46
Kdm3aQ6PCM1 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC24.2■■□□□ 1.46
Kdm3aQ6PCM1 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC24.2■■□□□ 1.46
Kdm3aQ6PCM1 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC24.2■■□□□ 1.46
Kdm3aQ6PCM1 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC24.2■■□□□ 1.46
Kdm3aQ6PCM1 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC24.2■■□□□ 1.46
Kdm3aQ6PCM1 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC24.2■■□□□ 1.46
Kdm3aQ6PCM1 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC24.2■■□□□ 1.46
Kdm3aQ6PCM1 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Kdm3aQ6PCM1 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC24.19■■□□□ 1.46
Kdm3aQ6PCM1 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Kdm3aQ6PCM1 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC24.19■■□□□ 1.46
Kdm3aQ6PCM1 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC24.18■■□□□ 1.46
Kdm3aQ6PCM1 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
Kdm3aQ6PCM1 Gm43060-201ENSMUST00000200621 289 ntBASIC24.18■■□□□ 1.46
Kdm3aQ6PCM1 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
Kdm3aQ6PCM1 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Kdm3aQ6PCM1 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC24.18■■□□□ 1.46
Kdm3aQ6PCM1 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC24.18■■□□□ 1.46
Kdm3aQ6PCM1 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Kdm3aQ6PCM1 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC24.17■■□□□ 1.46
Kdm3aQ6PCM1 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
Kdm3aQ6PCM1 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC24.17■■□□□ 1.46
Kdm3aQ6PCM1 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Retrieved 100 of 76,532 protein–RNA pairs in 14.8 ms