Protein–RNA interactions for Protein: Q62233

Six3, Homeobox protein SIX3, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six3Q62233 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Six3Q62233 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Six3Q62233 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Six3Q62233 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Six3Q62233 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC19.59■□□□□ 0.73
Six3Q62233 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Six3Q62233 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Six3Q62233 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Six3Q62233 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Six3Q62233 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Six3Q62233 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Six3Q62233 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
Six3Q62233 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Six3Q62233 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC19.58■□□□□ 0.72
Six3Q62233 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Six3Q62233 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Six3Q62233 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC19.58■□□□□ 0.72
Six3Q62233 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Six3Q62233 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Six3Q62233 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Six3Q62233 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC19.57■□□□□ 0.72
Six3Q62233 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Six3Q62233 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Six3Q62233 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Six3Q62233 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Six3Q62233 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Six3Q62233 Gm5812-201ENSMUST00000061073 957 ntBASIC19.57■□□□□ 0.72
Six3Q62233 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Six3Q62233 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Six3Q62233 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Six3Q62233 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Six3Q62233 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Six3Q62233 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC19.56■□□□□ 0.72
Six3Q62233 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Six3Q62233 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Six3Q62233 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Six3Q62233 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Six3Q62233 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Six3Q62233 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Six3Q62233 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Six3Q62233 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Six3Q62233 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Six3Q62233 Gm42501-201ENSMUST00000200220 1026 ntBASIC19.55■□□□□ 0.72
Six3Q62233 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Six3Q62233 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Six3Q62233 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Six3Q62233 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Six3Q62233 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Six3Q62233 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Six3Q62233 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Six3Q62233 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Six3Q62233 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Six3Q62233 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC19.54■□□□□ 0.72
Six3Q62233 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Six3Q62233 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Six3Q62233 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Six3Q62233 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Six3Q62233 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Six3Q62233 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Six3Q62233 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Six3Q62233 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Six3Q62233 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC19.54■□□□□ 0.72
Six3Q62233 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Six3Q62233 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Six3Q62233 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Six3Q62233 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Six3Q62233 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Six3Q62233 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Six3Q62233 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC19.53■□□□□ 0.72
Six3Q62233 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Six3Q62233 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Six3Q62233 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Six3Q62233 AC166356.1-201ENSMUST00000228236 1426 ntBASIC19.52■□□□□ 0.72
Six3Q62233 Iqck-206ENSMUST00000208658 2891 ntBASIC19.52■□□□□ 0.72
Six3Q62233 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Six3Q62233 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Six3Q62233 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Six3Q62233 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Six3Q62233 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Six3Q62233 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Six3Q62233 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Six3Q62233 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC19.51■□□□□ 0.71
Six3Q62233 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Six3Q62233 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Six3Q62233 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Six3Q62233 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Six3Q62233 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Six3Q62233 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Six3Q62233 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.5■□□□□ 0.71
Six3Q62233 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Six3Q62233 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Six3Q62233 Gm15546-201ENSMUST00000122095 826 ntBASIC19.5■□□□□ 0.71
Six3Q62233 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Six3Q62233 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Six3Q62233 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.5■□□□□ 0.71
Six3Q62233 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC19.49■□□□□ 0.71
Six3Q62233 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Six3Q62233 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC19.49■□□□□ 0.71
Six3Q62233 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC19.49■□□□□ 0.71
Six3Q62233 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms