Protein–RNA interactions for Protein: Q61818

Rai1, Retinoic acid-induced protein 1, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rai1Q61818 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Rai1Q61818 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC19.6■□□□□ 0.73
Rai1Q61818 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC19.6■□□□□ 0.73
Rai1Q61818 Mir6236-201ENSMUST00000184437 123 ntBASIC19.6■□□□□ 0.73
Rai1Q61818 Gm42778-201ENSMUST00000199644 553 ntBASIC19.6■□□□□ 0.73
Rai1Q61818 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rai1Q61818 Gm9988-201ENSMUST00000069786 435 ntBASIC19.6■□□□□ 0.73
Rai1Q61818 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rai1Q61818 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rai1Q61818 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rai1Q61818 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rai1Q61818 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC19.6■□□□□ 0.73
Rai1Q61818 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC19.6■□□□□ 0.73
Rai1Q61818 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rai1Q61818 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC19.6■□□□□ 0.73
Rai1Q61818 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rai1Q61818 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rai1Q61818 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rai1Q61818 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Rai1Q61818 AC137127.1-201ENSMUST00000213466 1078 ntBASIC19.59■□□□□ 0.73
Rai1Q61818 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rai1Q61818 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rai1Q61818 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC19.59■□□□□ 0.73
Rai1Q61818 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rai1Q61818 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rai1Q61818 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Rai1Q61818 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Rai1Q61818 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Rai1Q61818 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Rai1Q61818 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
Rai1Q61818 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC19.58■□□□□ 0.72
Rai1Q61818 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Rai1Q61818 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Rai1Q61818 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rai1Q61818 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rai1Q61818 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rai1Q61818 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rai1Q61818 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Rai1Q61818 Ap3s1-204ENSMUST00000225520 957 ntBASIC19.57■□□□□ 0.72
Rai1Q61818 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rai1Q61818 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rai1Q61818 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Rai1Q61818 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rai1Q61818 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Rai1Q61818 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
Rai1Q61818 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC19.56■□□□□ 0.72
Rai1Q61818 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Rai1Q61818 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rai1Q61818 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Rai1Q61818 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rai1Q61818 Gm13234-201ENSMUST00000120010 747 ntBASIC19.56■□□□□ 0.72
Rai1Q61818 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Rai1Q61818 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Rai1Q61818 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC19.56■□□□□ 0.72
Rai1Q61818 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
Rai1Q61818 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC19.56■□□□□ 0.72
Rai1Q61818 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rai1Q61818 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC19.55■□□□□ 0.72
Rai1Q61818 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC19.55■□□□□ 0.72
Rai1Q61818 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rai1Q61818 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Rai1Q61818 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Rai1Q61818 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Rai1Q61818 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rai1Q61818 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC19.54■□□□□ 0.72
Rai1Q61818 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Rai1Q61818 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Rai1Q61818 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Rai1Q61818 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Rai1Q61818 Reep4-203ENSMUST00000226563 1444 ntBASIC19.54■□□□□ 0.72
Rai1Q61818 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rai1Q61818 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
Rai1Q61818 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Rai1Q61818 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Rai1Q61818 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC19.54■□□□□ 0.72
Rai1Q61818 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC19.54■□□□□ 0.72
Rai1Q61818 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rai1Q61818 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rai1Q61818 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rai1Q61818 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rai1Q61818 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC19.53■□□□□ 0.72
Rai1Q61818 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rai1Q61818 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rai1Q61818 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rai1Q61818 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Rai1Q61818 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC19.53■□□□□ 0.72
Rai1Q61818 AC122428.2-201ENSMUST00000216321 1832 ntBASIC19.53■□□□□ 0.72
Rai1Q61818 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Rai1Q61818 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Rai1Q61818 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC19.52■□□□□ 0.72
Rai1Q61818 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rai1Q61818 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Rai1Q61818 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC19.52■□□□□ 0.71
Rai1Q61818 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Rai1Q61818 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rai1Q61818 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rai1Q61818 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rai1Q61818 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rai1Q61818 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rai1Q61818 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms