Protein–RNA interactions for Protein: Q61500

Itm2a, Integral membrane protein 2A, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Itm2aQ61500 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Itm2aQ61500 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Itm2aQ61500 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Itm2aQ61500 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
Itm2aQ61500 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC19.69■□□□□ 0.74
Itm2aQ61500 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Itm2aQ61500 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
Itm2aQ61500 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC19.69■□□□□ 0.74
Itm2aQ61500 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Itm2aQ61500 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC19.69■□□□□ 0.74
Itm2aQ61500 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Itm2aQ61500 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC19.69■□□□□ 0.74
Itm2aQ61500 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Itm2aQ61500 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Itm2aQ61500 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
Itm2aQ61500 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Itm2aQ61500 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Itm2aQ61500 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Itm2aQ61500 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19.68■□□□□ 0.74
Itm2aQ61500 Gm5067-201ENSMUST00000170449 1009 ntBASIC19.68■□□□□ 0.74
Itm2aQ61500 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Itm2aQ61500 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Itm2aQ61500 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Itm2aQ61500 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Itm2aQ61500 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Itm2aQ61500 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Itm2aQ61500 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Itm2aQ61500 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Itm2aQ61500 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Itm2aQ61500 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
Itm2aQ61500 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Itm2aQ61500 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Itm2aQ61500 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Itm2aQ61500 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Itm2aQ61500 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Itm2aQ61500 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Itm2aQ61500 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Itm2aQ61500 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Itm2aQ61500 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Itm2aQ61500 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Itm2aQ61500 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Itm2aQ61500 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Itm2aQ61500 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Itm2aQ61500 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Itm2aQ61500 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Itm2aQ61500 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Itm2aQ61500 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Itm2aQ61500 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Itm2aQ61500 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Itm2aQ61500 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Itm2aQ61500 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Itm2aQ61500 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Itm2aQ61500 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Itm2aQ61500 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Itm2aQ61500 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC19.65■□□□□ 0.74
Itm2aQ61500 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
Itm2aQ61500 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Itm2aQ61500 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Itm2aQ61500 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Itm2aQ61500 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Itm2aQ61500 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Itm2aQ61500 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Itm2aQ61500 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Itm2aQ61500 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Itm2aQ61500 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Itm2aQ61500 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Itm2aQ61500 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Itm2aQ61500 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Itm2aQ61500 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Itm2aQ61500 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Itm2aQ61500 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
Itm2aQ61500 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Itm2aQ61500 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC19.63■□□□□ 0.73
Itm2aQ61500 Nsd1-203ENSMUST00000224156 1149 ntBASIC19.63■□□□□ 0.73
Itm2aQ61500 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Itm2aQ61500 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Itm2aQ61500 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC19.62■□□□□ 0.73
Itm2aQ61500 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Itm2aQ61500 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Itm2aQ61500 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Itm2aQ61500 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Itm2aQ61500 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Itm2aQ61500 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC19.62■□□□□ 0.73
Itm2aQ61500 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Itm2aQ61500 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Itm2aQ61500 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Itm2aQ61500 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Itm2aQ61500 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Itm2aQ61500 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Itm2aQ61500 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Itm2aQ61500 Gm16464-201ENSMUST00000117815 1095 ntBASIC19.61■□□□□ 0.73
Itm2aQ61500 Mir6538-201ENSMUST00000183713 110 ntBASIC19.61■□□□□ 0.73
Itm2aQ61500 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC19.61■□□□□ 0.73
Itm2aQ61500 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC19.61■□□□□ 0.73
Itm2aQ61500 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Itm2aQ61500 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Itm2aQ61500 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Itm2aQ61500 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Itm2aQ61500 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Itm2aQ61500 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms