Protein–RNA interactions for Protein: Q61191

Hcfc1, Host cell factor 1, mousemouse

Known RBP Predictions only

Length 2,045 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcfc1Q61191 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Hcfc1Q61191 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC17.08■□□□□ 0.33
Hcfc1Q61191 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Hcfc1Q61191 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hcfc1Q61191 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hcfc1Q61191 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Hcfc1Q61191 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hcfc1Q61191 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC17.08■□□□□ 0.32
Hcfc1Q61191 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hcfc1Q61191 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Hcfc1Q61191 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hcfc1Q61191 Gm37415-201ENSMUST00000192265 2054 ntBASIC17.07■□□□□ 0.32
Hcfc1Q61191 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hcfc1Q61191 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hcfc1Q61191 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hcfc1Q61191 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hcfc1Q61191 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC17.07■□□□□ 0.32
Hcfc1Q61191 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Hcfc1Q61191 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hcfc1Q61191 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Hcfc1Q61191 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Hcfc1Q61191 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hcfc1Q61191 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hcfc1Q61191 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hcfc1Q61191 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hcfc1Q61191 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Hcfc1Q61191 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hcfc1Q61191 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC17.05■□□□□ 0.32
Hcfc1Q61191 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hcfc1Q61191 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Hcfc1Q61191 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Hcfc1Q61191 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Hcfc1Q61191 Gm13148-201ENSMUST00000118892 745 ntBASIC17.05■□□□□ 0.32
Hcfc1Q61191 Mir6236-201ENSMUST00000184437 123 ntBASIC17.05■□□□□ 0.32
Hcfc1Q61191 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
Hcfc1Q61191 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hcfc1Q61191 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hcfc1Q61191 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hcfc1Q61191 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hcfc1Q61191 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Hcfc1Q61191 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
Hcfc1Q61191 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hcfc1Q61191 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hcfc1Q61191 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hcfc1Q61191 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Hcfc1Q61191 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
Hcfc1Q61191 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Hcfc1Q61191 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hcfc1Q61191 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hcfc1Q61191 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hcfc1Q61191 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Hcfc1Q61191 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Hcfc1Q61191 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Hcfc1Q61191 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hcfc1Q61191 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hcfc1Q61191 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC17.03■□□□□ 0.32
Hcfc1Q61191 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hcfc1Q61191 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hcfc1Q61191 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hcfc1Q61191 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Hcfc1Q61191 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Hcfc1Q61191 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC17.03■□□□□ 0.32
Hcfc1Q61191 Gm7514-201ENSMUST00000209475 934 ntBASIC17.03■□□□□ 0.32
Hcfc1Q61191 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hcfc1Q61191 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hcfc1Q61191 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Hcfc1Q61191 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hcfc1Q61191 Gm10571-201ENSMUST00000097869 1638 ntBASIC17.02■□□□□ 0.32
Hcfc1Q61191 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Hcfc1Q61191 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Hcfc1Q61191 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
Hcfc1Q61191 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Hcfc1Q61191 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC17.01■□□□□ 0.31
Hcfc1Q61191 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
Hcfc1Q61191 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hcfc1Q61191 Gm43859-201ENSMUST00000200075 1412 ntBASIC17.01■□□□□ 0.31
Hcfc1Q61191 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hcfc1Q61191 Gm4968-201ENSMUST00000071458 858 ntBASIC17.01■□□□□ 0.31
Hcfc1Q61191 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hcfc1Q61191 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hcfc1Q61191 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Hcfc1Q61191 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Hcfc1Q61191 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hcfc1Q61191 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hcfc1Q61191 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hcfc1Q61191 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Hcfc1Q61191 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC17■□□□□ 0.31
Hcfc1Q61191 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Hcfc1Q61191 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC17■□□□□ 0.31
Hcfc1Q61191 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC17■□□□□ 0.31
Hcfc1Q61191 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Hcfc1Q61191 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Hcfc1Q61191 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Hcfc1Q61191 Gm44949-201ENSMUST00000206423 1450 ntBASIC17■□□□□ 0.31
Hcfc1Q61191 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Hcfc1Q61191 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Hcfc1Q61191 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Hcfc1Q61191 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC16.99■□□□□ 0.31
Hcfc1Q61191 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC16.99■□□□□ 0.31
Hcfc1Q61191 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms