Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav3-1Q5R1I8 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav3-1Q5R1I8 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav3-1Q5R1I8 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav3-1Q5R1I8 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC13.65□□□□□ -0.22
Trav3-1Q5R1I8 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav3-1Q5R1I8 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav3-1Q5R1I8 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav3-1Q5R1I8 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav3-1Q5R1I8 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav3-1Q5R1I8 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav3-1Q5R1I8 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav3-1Q5R1I8 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav3-1Q5R1I8 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav3-1Q5R1I8 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav3-1Q5R1I8 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav3-1Q5R1I8 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav3-1Q5R1I8 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav3-1Q5R1I8 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav3-1Q5R1I8 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav3-1Q5R1I8 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav3-1Q5R1I8 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav3-1Q5R1I8 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav3-1Q5R1I8 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav3-1Q5R1I8 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav3-1Q5R1I8 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Trav3-1Q5R1I8 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav3-1Q5R1I8 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav3-1Q5R1I8 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Trav3-1Q5R1I8 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav3-1Q5R1I8 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Trav3-1Q5R1I8 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav3-1Q5R1I8 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav3-1Q5R1I8 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav3-1Q5R1I8 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav3-1Q5R1I8 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Trav3-1Q5R1I8 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav3-1Q5R1I8 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav3-1Q5R1I8 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav3-1Q5R1I8 Gm5953-201ENSMUST00000220644 2616 ntBASIC13.62□□□□□ -0.23
Trav3-1Q5R1I8 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Trav3-1Q5R1I8 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Trav3-1Q5R1I8 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav3-1Q5R1I8 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav3-1Q5R1I8 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav3-1Q5R1I8 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav3-1Q5R1I8 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav3-1Q5R1I8 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC13.62□□□□□ -0.23
Trav3-1Q5R1I8 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav3-1Q5R1I8 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav3-1Q5R1I8 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav3-1Q5R1I8 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav3-1Q5R1I8 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
Trav3-1Q5R1I8 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Trav3-1Q5R1I8 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
Trav3-1Q5R1I8 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav3-1Q5R1I8 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav3-1Q5R1I8 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav3-1Q5R1I8 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav3-1Q5R1I8 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav3-1Q5R1I8 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Trav3-1Q5R1I8 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav3-1Q5R1I8 Gm25238-201ENSMUST00000174914 89 ntBASIC13.61□□□□□ -0.23
Trav3-1Q5R1I8 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC13.61□□□□□ -0.23
Trav3-1Q5R1I8 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav3-1Q5R1I8 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav3-1Q5R1I8 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav3-1Q5R1I8 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav3-1Q5R1I8 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav3-1Q5R1I8 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav3-1Q5R1I8 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Trav3-1Q5R1I8 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav3-1Q5R1I8 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav3-1Q5R1I8 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav3-1Q5R1I8 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav3-1Q5R1I8 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav3-1Q5R1I8 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav3-1Q5R1I8 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC13.6□□□□□ -0.23
Trav3-1Q5R1I8 Gm25262-201ENSMUST00000174934 133 ntBASIC13.6□□□□□ -0.23
Trav3-1Q5R1I8 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav3-1Q5R1I8 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav3-1Q5R1I8 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Trav3-1Q5R1I8 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Trav3-1Q5R1I8 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav3-1Q5R1I8 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav3-1Q5R1I8 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav3-1Q5R1I8 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav3-1Q5R1I8 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Trav3-1Q5R1I8 Fst-202ENSMUST00000223640 2612 ntBASIC13.6□□□□□ -0.23
Trav3-1Q5R1I8 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trav3-1Q5R1I8 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav3-1Q5R1I8 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav3-1Q5R1I8 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav3-1Q5R1I8 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav3-1Q5R1I8 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
Trav3-1Q5R1I8 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Trav3-1Q5R1I8 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav3-1Q5R1I8 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav3-1Q5R1I8 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Trav3-1Q5R1I8 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms