Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav15-1-dv6-1Q5R1D2 Gm8093-201ENSMUST00000128935 1892 ntBASIC15.53■□□□□ 0.08
Trav15-1-dv6-1Q5R1D2 Gm28536-201ENSMUST00000190971 1317 ntBASIC15.53■□□□□ 0.08
Trav15-1-dv6-1Q5R1D2 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Trav15-1-dv6-1Q5R1D2 Gm14523-201ENSMUST00000117260 558 ntBASIC15.53■□□□□ 0.08
Trav15-1-dv6-1Q5R1D2 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trav15-1-dv6-1Q5R1D2 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav15-1-dv6-1Q5R1D2 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav15-1-dv6-1Q5R1D2 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav15-1-dv6-1Q5R1D2 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC15.53■□□□□ 0.08
Trav15-1-dv6-1Q5R1D2 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav15-1-dv6-1Q5R1D2 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Trav15-1-dv6-1Q5R1D2 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Trav15-1-dv6-1Q5R1D2 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav15-1-dv6-1Q5R1D2 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav15-1-dv6-1Q5R1D2 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav15-1-dv6-1Q5R1D2 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
Trav15-1-dv6-1Q5R1D2 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC15.52■□□□□ 0.08
Trav15-1-dv6-1Q5R1D2 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav15-1-dv6-1Q5R1D2 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav15-1-dv6-1Q5R1D2 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC15.52■□□□□ 0.07
Trav15-1-dv6-1Q5R1D2 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav15-1-dv6-1Q5R1D2 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Trav15-1-dv6-1Q5R1D2 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav15-1-dv6-1Q5R1D2 Hsf1-204ENSMUST00000226872 2104 ntBASIC15.52■□□□□ 0.07
Trav15-1-dv6-1Q5R1D2 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav15-1-dv6-1Q5R1D2 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav15-1-dv6-1Q5R1D2 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC15.51■□□□□ 0.07
Trav15-1-dv6-1Q5R1D2 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav15-1-dv6-1Q5R1D2 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav15-1-dv6-1Q5R1D2 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav15-1-dv6-1Q5R1D2 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC15.51■□□□□ 0.07
Trav15-1-dv6-1Q5R1D2 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trav15-1-dv6-1Q5R1D2 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC15.51■□□□□ 0.07
Trav15-1-dv6-1Q5R1D2 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav15-1-dv6-1Q5R1D2 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
Trav15-1-dv6-1Q5R1D2 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav15-1-dv6-1Q5R1D2 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav15-1-dv6-1Q5R1D2 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav15-1-dv6-1Q5R1D2 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Trav15-1-dv6-1Q5R1D2 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav15-1-dv6-1Q5R1D2 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav15-1-dv6-1Q5R1D2 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav15-1-dv6-1Q5R1D2 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav15-1-dv6-1Q5R1D2 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav15-1-dv6-1Q5R1D2 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav15-1-dv6-1Q5R1D2 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC15.5■□□□□ 0.07
Trav15-1-dv6-1Q5R1D2 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trav15-1-dv6-1Q5R1D2 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav15-1-dv6-1Q5R1D2 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav15-1-dv6-1Q5R1D2 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav15-1-dv6-1Q5R1D2 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav15-1-dv6-1Q5R1D2 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trav15-1-dv6-1Q5R1D2 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Trav15-1-dv6-1Q5R1D2 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trav15-1-dv6-1Q5R1D2 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav15-1-dv6-1Q5R1D2 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav15-1-dv6-1Q5R1D2 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav15-1-dv6-1Q5R1D2 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav15-1-dv6-1Q5R1D2 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav15-1-dv6-1Q5R1D2 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav15-1-dv6-1Q5R1D2 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Trav15-1-dv6-1Q5R1D2 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav15-1-dv6-1Q5R1D2 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav15-1-dv6-1Q5R1D2 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Trav15-1-dv6-1Q5R1D2 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav15-1-dv6-1Q5R1D2 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trav15-1-dv6-1Q5R1D2 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC15.48■□□□□ 0.07
Trav15-1-dv6-1Q5R1D2 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Trav15-1-dv6-1Q5R1D2 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav15-1-dv6-1Q5R1D2 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC15.48■□□□□ 0.07
Trav15-1-dv6-1Q5R1D2 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trav15-1-dv6-1Q5R1D2 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav15-1-dv6-1Q5R1D2 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav15-1-dv6-1Q5R1D2 Gm7332-201ENSMUST00000118351 454 ntBASIC15.47■□□□□ 0.07
Trav15-1-dv6-1Q5R1D2 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC15.47■□□□□ 0.07
Trav15-1-dv6-1Q5R1D2 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trav15-1-dv6-1Q5R1D2 Gm27502-201ENSMUST00000183495 199 ntBASIC15.47■□□□□ 0.07
Trav15-1-dv6-1Q5R1D2 Gm43909-201ENSMUST00000203443 1876 ntBASIC15.47■□□□□ 0.07
Trav15-1-dv6-1Q5R1D2 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC15.47■□□□□ 0.07
Trav15-1-dv6-1Q5R1D2 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav15-1-dv6-1Q5R1D2 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav15-1-dv6-1Q5R1D2 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC15.47■□□□□ 0.07
Trav15-1-dv6-1Q5R1D2 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC15.47■□□□□ 0.07
Trav15-1-dv6-1Q5R1D2 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav15-1-dv6-1Q5R1D2 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav15-1-dv6-1Q5R1D2 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC15.46■□□□□ 0.07
Trav15-1-dv6-1Q5R1D2 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav15-1-dv6-1Q5R1D2 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav15-1-dv6-1Q5R1D2 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav15-1-dv6-1Q5R1D2 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav15-1-dv6-1Q5R1D2 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trav15-1-dv6-1Q5R1D2 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC15.46■□□□□ 0.07
Trav15-1-dv6-1Q5R1D2 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav15-1-dv6-1Q5R1D2 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Trav15-1-dv6-1Q5R1D2 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav15-1-dv6-1Q5R1D2 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Trav15-1-dv6-1Q5R1D2 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Trav15-1-dv6-1Q5R1D2 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Trav15-1-dv6-1Q5R1D2 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms