Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav3-3Q5R1C3 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav3-3Q5R1C3 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav3-3Q5R1C3 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trav3-3Q5R1C3 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav3-3Q5R1C3 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav3-3Q5R1C3 AC167019.3-201ENSMUST00000228225 1266 ntBASIC14.94□□□□□ -0.02
Trav3-3Q5R1C3 Pkd1-207ENSMUST00000228550 1050 ntBASIC14.94□□□□□ -0.02
Trav3-3Q5R1C3 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav3-3Q5R1C3 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav3-3Q5R1C3 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Trav3-3Q5R1C3 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC14.94□□□□□ -0.02
Trav3-3Q5R1C3 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav3-3Q5R1C3 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC14.94□□□□□ -0.02
Trav3-3Q5R1C3 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trav3-3Q5R1C3 Gm43548-201ENSMUST00000197139 2353 ntBASIC14.93□□□□□ -0.02
Trav3-3Q5R1C3 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav3-3Q5R1C3 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC14.93□□□□□ -0.02
Trav3-3Q5R1C3 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav3-3Q5R1C3 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav3-3Q5R1C3 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC14.93□□□□□ -0.02
Trav3-3Q5R1C3 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Trav3-3Q5R1C3 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Trav3-3Q5R1C3 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trav3-3Q5R1C3 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav3-3Q5R1C3 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav3-3Q5R1C3 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav3-3Q5R1C3 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav3-3Q5R1C3 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
Trav3-3Q5R1C3 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav3-3Q5R1C3 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav3-3Q5R1C3 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav3-3Q5R1C3 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trav3-3Q5R1C3 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav3-3Q5R1C3 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav3-3Q5R1C3 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC14.92□□□□□ -0.02
Trav3-3Q5R1C3 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav3-3Q5R1C3 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Trav3-3Q5R1C3 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav3-3Q5R1C3 Gm35558-201ENSMUST00000222675 2219 ntBASIC14.91□□□□□ -0.02
Trav3-3Q5R1C3 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav3-3Q5R1C3 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav3-3Q5R1C3 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav3-3Q5R1C3 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Trav3-3Q5R1C3 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Trav3-3Q5R1C3 Fam105a-203ENSMUST00000226170 3043 ntBASIC14.91□□□□□ -0.02
Trav3-3Q5R1C3 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC14.91□□□□□ -0.02
Trav3-3Q5R1C3 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Trav3-3Q5R1C3 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav3-3Q5R1C3 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trav3-3Q5R1C3 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav3-3Q5R1C3 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav3-3Q5R1C3 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trav3-3Q5R1C3 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC14.91□□□□□ -0.02
Trav3-3Q5R1C3 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav3-3Q5R1C3 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav3-3Q5R1C3 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav3-3Q5R1C3 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trav3-3Q5R1C3 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Trav3-3Q5R1C3 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC14.9□□□□□ -0.02
Trav3-3Q5R1C3 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav3-3Q5R1C3 AC154231.1-201ENSMUST00000220564 2175 ntBASIC14.9□□□□□ -0.02
Trav3-3Q5R1C3 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav3-3Q5R1C3 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav3-3Q5R1C3 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav3-3Q5R1C3 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav3-3Q5R1C3 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav3-3Q5R1C3 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav3-3Q5R1C3 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Trav3-3Q5R1C3 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav3-3Q5R1C3 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav3-3Q5R1C3 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav3-3Q5R1C3 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Trav3-3Q5R1C3 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav3-3Q5R1C3 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav3-3Q5R1C3 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav3-3Q5R1C3 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav3-3Q5R1C3 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Trav3-3Q5R1C3 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav3-3Q5R1C3 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav3-3Q5R1C3 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trav3-3Q5R1C3 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav3-3Q5R1C3 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav3-3Q5R1C3 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav3-3Q5R1C3 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav3-3Q5R1C3 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav3-3Q5R1C3 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Trav3-3Q5R1C3 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav3-3Q5R1C3 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC14.88□□□□□ -0.03
Trav3-3Q5R1C3 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trav3-3Q5R1C3 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Trav3-3Q5R1C3 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trav3-3Q5R1C3 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav3-3Q5R1C3 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav3-3Q5R1C3 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trav3-3Q5R1C3 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
Trav3-3Q5R1C3 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Trav3-3Q5R1C3 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC14.88□□□□□ -0.03
Trav3-3Q5R1C3 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav3-3Q5R1C3 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms