Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Rnf20Q5DTM8 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Rnf20Q5DTM8 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Rnf20Q5DTM8 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
Rnf20Q5DTM8 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
Rnf20Q5DTM8 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Rnf20Q5DTM8 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
Rnf20Q5DTM8 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Rnf20Q5DTM8 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Rnf20Q5DTM8 Mir6236-201ENSMUST00000184437 123 ntBASIC23.84■■□□□ 1.41
Rnf20Q5DTM8 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC23.84■■□□□ 1.41
Rnf20Q5DTM8 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC23.84■■□□□ 1.41
Rnf20Q5DTM8 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC23.84■■□□□ 1.41
Rnf20Q5DTM8 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC23.84■■□□□ 1.41
Rnf20Q5DTM8 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
Rnf20Q5DTM8 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
Rnf20Q5DTM8 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Rnf20Q5DTM8 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Rnf20Q5DTM8 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Rnf20Q5DTM8 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
Rnf20Q5DTM8 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
Rnf20Q5DTM8 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Rnf20Q5DTM8 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC23.83■■□□□ 1.41
Rnf20Q5DTM8 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
Rnf20Q5DTM8 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Rnf20Q5DTM8 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
Rnf20Q5DTM8 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC23.83■■□□□ 1.4
Rnf20Q5DTM8 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
Rnf20Q5DTM8 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC23.83■■□□□ 1.4
Rnf20Q5DTM8 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC23.83■■□□□ 1.4
Rnf20Q5DTM8 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
Rnf20Q5DTM8 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Rnf20Q5DTM8 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Rnf20Q5DTM8 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
Rnf20Q5DTM8 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Rnf20Q5DTM8 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Rnf20Q5DTM8 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Rnf20Q5DTM8 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
Rnf20Q5DTM8 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC23.81■■□□□ 1.4
Rnf20Q5DTM8 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Rnf20Q5DTM8 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Rnf20Q5DTM8 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Rnf20Q5DTM8 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Rnf20Q5DTM8 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Rnf20Q5DTM8 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Rnf20Q5DTM8 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Rnf20Q5DTM8 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC23.8■■□□□ 1.4
Rnf20Q5DTM8 Krt8-ps-201ENSMUST00000208495 945 ntBASIC23.8■■□□□ 1.4
Rnf20Q5DTM8 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Rnf20Q5DTM8 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC23.8■■□□□ 1.4
Rnf20Q5DTM8 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Rnf20Q5DTM8 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Rnf20Q5DTM8 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC23.8■■□□□ 1.4
Rnf20Q5DTM8 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Rnf20Q5DTM8 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
Rnf20Q5DTM8 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC23.79■■□□□ 1.4
Rnf20Q5DTM8 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Rnf20Q5DTM8 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Rnf20Q5DTM8 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
Rnf20Q5DTM8 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Rnf20Q5DTM8 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Rnf20Q5DTM8 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Rnf20Q5DTM8 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Rnf20Q5DTM8 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
Rnf20Q5DTM8 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Rnf20Q5DTM8 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Rnf20Q5DTM8 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Rnf20Q5DTM8 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Rnf20Q5DTM8 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC23.77■■□□□ 1.4
Rnf20Q5DTM8 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC23.77■■□□□ 1.4
Rnf20Q5DTM8 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Rnf20Q5DTM8 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
Rnf20Q5DTM8 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC23.76■■□□□ 1.39
Rnf20Q5DTM8 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Rnf20Q5DTM8 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Rnf20Q5DTM8 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Rnf20Q5DTM8 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Rnf20Q5DTM8 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Rnf20Q5DTM8 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Rnf20Q5DTM8 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Rnf20Q5DTM8 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
Rnf20Q5DTM8 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Rnf20Q5DTM8 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Rnf20Q5DTM8 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Rnf20Q5DTM8 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC23.75■■□□□ 1.39
Rnf20Q5DTM8 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC23.75■■□□□ 1.39
Rnf20Q5DTM8 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Rnf20Q5DTM8 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Rnf20Q5DTM8 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Rnf20Q5DTM8 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Rnf20Q5DTM8 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC23.74■■□□□ 1.39
Rnf20Q5DTM8 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC23.74■■□□□ 1.39
Rnf20Q5DTM8 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Rnf20Q5DTM8 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
Rnf20Q5DTM8 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Rnf20Q5DTM8 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Rnf20Q5DTM8 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Rnf20Q5DTM8 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Rnf20Q5DTM8 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Rnf20Q5DTM8 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC23.73■■□□□ 1.39
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms