Protein–RNA interactions for Protein: Q3V061

Trim80, Tripartite motif-containing 80, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim80Q3V061 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trim80Q3V061 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Trim80Q3V061 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trim80Q3V061 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC20.48■□□□□ 0.87
Trim80Q3V061 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trim80Q3V061 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC20.48■□□□□ 0.87
Trim80Q3V061 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC20.48■□□□□ 0.87
Trim80Q3V061 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trim80Q3V061 AC158990.1-201ENSMUST00000221450 2016 ntBASIC20.48■□□□□ 0.87
Trim80Q3V061 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trim80Q3V061 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trim80Q3V061 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trim80Q3V061 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trim80Q3V061 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trim80Q3V061 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC20.47■□□□□ 0.87
Trim80Q3V061 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trim80Q3V061 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trim80Q3V061 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trim80Q3V061 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Trim80Q3V061 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.46■□□□□ 0.87
Trim80Q3V061 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Trim80Q3V061 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trim80Q3V061 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Trim80Q3V061 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC20.46■□□□□ 0.87
Trim80Q3V061 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Trim80Q3V061 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trim80Q3V061 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trim80Q3V061 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Trim80Q3V061 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Trim80Q3V061 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trim80Q3V061 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trim80Q3V061 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trim80Q3V061 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trim80Q3V061 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC20.45■□□□□ 0.86
Trim80Q3V061 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC20.45■□□□□ 0.86
Trim80Q3V061 Gm5131-201ENSMUST00000212776 1238 ntBASIC20.45■□□□□ 0.86
Trim80Q3V061 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trim80Q3V061 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Trim80Q3V061 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Trim80Q3V061 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC20.45■□□□□ 0.86
Trim80Q3V061 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trim80Q3V061 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Trim80Q3V061 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trim80Q3V061 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Trim80Q3V061 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
Trim80Q3V061 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC20.44■□□□□ 0.86
Trim80Q3V061 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Trim80Q3V061 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trim80Q3V061 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC20.44■□□□□ 0.86
Trim80Q3V061 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Trim80Q3V061 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trim80Q3V061 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Trim80Q3V061 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Trim80Q3V061 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC20.44■□□□□ 0.86
Trim80Q3V061 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trim80Q3V061 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trim80Q3V061 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trim80Q3V061 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trim80Q3V061 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Trim80Q3V061 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trim80Q3V061 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Trim80Q3V061 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trim80Q3V061 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trim80Q3V061 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trim80Q3V061 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trim80Q3V061 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trim80Q3V061 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC20.42■□□□□ 0.86
Trim80Q3V061 Gm16464-201ENSMUST00000117815 1095 ntBASIC20.42■□□□□ 0.86
Trim80Q3V061 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC20.42■□□□□ 0.86
Trim80Q3V061 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Trim80Q3V061 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trim80Q3V061 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC20.42■□□□□ 0.86
Trim80Q3V061 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trim80Q3V061 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Trim80Q3V061 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trim80Q3V061 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trim80Q3V061 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trim80Q3V061 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trim80Q3V061 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trim80Q3V061 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trim80Q3V061 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC20.4■□□□□ 0.86
Trim80Q3V061 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trim80Q3V061 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Trim80Q3V061 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trim80Q3V061 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC20.4■□□□□ 0.86
Trim80Q3V061 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC20.4■□□□□ 0.86
Trim80Q3V061 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Trim80Q3V061 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trim80Q3V061 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trim80Q3V061 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Trim80Q3V061 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trim80Q3V061 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trim80Q3V061 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Trim80Q3V061 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Trim80Q3V061 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trim80Q3V061 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC20.39■□□□□ 0.85
Trim80Q3V061 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Trim80Q3V061 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC20.39■□□□□ 0.85
Trim80Q3V061 Nsd1-206ENSMUST00000224918 1001 ntBASIC20.39■□□□□ 0.85
Trim80Q3V061 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms