Protein–RNA interactions for Protein: Q3UW12

Cnga4, Cyclic nucleotide-gated cation channel alpha-4, mousemouse

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnga4Q3UW12 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cnga4Q3UW12 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Cnga4Q3UW12 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Cnga4Q3UW12 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Cnga4Q3UW12 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC20.3■□□□□ 0.84
Cnga4Q3UW12 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cnga4Q3UW12 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cnga4Q3UW12 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cnga4Q3UW12 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cnga4Q3UW12 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cnga4Q3UW12 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cnga4Q3UW12 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cnga4Q3UW12 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cnga4Q3UW12 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC20.29■□□□□ 0.84
Cnga4Q3UW12 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cnga4Q3UW12 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Cnga4Q3UW12 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC20.29■□□□□ 0.84
Cnga4Q3UW12 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Cnga4Q3UW12 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cnga4Q3UW12 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Cnga4Q3UW12 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cnga4Q3UW12 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC20.29■□□□□ 0.84
Cnga4Q3UW12 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cnga4Q3UW12 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Cnga4Q3UW12 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Cnga4Q3UW12 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cnga4Q3UW12 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cnga4Q3UW12 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cnga4Q3UW12 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cnga4Q3UW12 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC20.27■□□□□ 0.84
Cnga4Q3UW12 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cnga4Q3UW12 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cnga4Q3UW12 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cnga4Q3UW12 Gm7332-201ENSMUST00000118351 454 ntBASIC20.27■□□□□ 0.84
Cnga4Q3UW12 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cnga4Q3UW12 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cnga4Q3UW12 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
Cnga4Q3UW12 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC20.27■□□□□ 0.83
Cnga4Q3UW12 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Cnga4Q3UW12 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cnga4Q3UW12 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Cnga4Q3UW12 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cnga4Q3UW12 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cnga4Q3UW12 Gm43909-201ENSMUST00000203443 1876 ntBASIC20.25■□□□□ 0.83
Cnga4Q3UW12 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cnga4Q3UW12 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cnga4Q3UW12 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cnga4Q3UW12 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cnga4Q3UW12 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Cnga4Q3UW12 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cnga4Q3UW12 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cnga4Q3UW12 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cnga4Q3UW12 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cnga4Q3UW12 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Cnga4Q3UW12 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Cnga4Q3UW12 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cnga4Q3UW12 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Cnga4Q3UW12 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cnga4Q3UW12 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Cnga4Q3UW12 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cnga4Q3UW12 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC20.23■□□□□ 0.83
Cnga4Q3UW12 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC20.23■□□□□ 0.83
Cnga4Q3UW12 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cnga4Q3UW12 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Cnga4Q3UW12 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Cnga4Q3UW12 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cnga4Q3UW12 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC20.22■□□□□ 0.83
Cnga4Q3UW12 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Cnga4Q3UW12 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cnga4Q3UW12 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Cnga4Q3UW12 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Cnga4Q3UW12 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Cnga4Q3UW12 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cnga4Q3UW12 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC20.22■□□□□ 0.83
Cnga4Q3UW12 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Cnga4Q3UW12 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cnga4Q3UW12 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Cnga4Q3UW12 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC20.21■□□□□ 0.83
Cnga4Q3UW12 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cnga4Q3UW12 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cnga4Q3UW12 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cnga4Q3UW12 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cnga4Q3UW12 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cnga4Q3UW12 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Cnga4Q3UW12 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cnga4Q3UW12 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cnga4Q3UW12 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cnga4Q3UW12 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC20.2■□□□□ 0.82
Cnga4Q3UW12 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cnga4Q3UW12 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cnga4Q3UW12 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cnga4Q3UW12 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Cnga4Q3UW12 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC20.2■□□□□ 0.82
Cnga4Q3UW12 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cnga4Q3UW12 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Cnga4Q3UW12 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cnga4Q3UW12 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cnga4Q3UW12 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cnga4Q3UW12 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cnga4Q3UW12 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC20.19■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms