Protein–RNA interactions for Protein: Q3UU56

Gm29609, Predicted gene 29609, mousemouse

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm29609Q3UU56 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Gm29609Q3UU56 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Gm29609Q3UU56 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Gm29609Q3UU56 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Gm29609Q3UU56 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Gm29609Q3UU56 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Gm29609Q3UU56 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Gm29609Q3UU56 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Gm29609Q3UU56 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Gm29609Q3UU56 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Gm29609Q3UU56 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Gm29609Q3UU56 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Gm29609Q3UU56 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Gm29609Q3UU56 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Gm29609Q3UU56 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC20.99■□□□□ 0.95
Gm29609Q3UU56 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC20.99■□□□□ 0.95
Gm29609Q3UU56 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Gm29609Q3UU56 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Gm29609Q3UU56 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Gm29609Q3UU56 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Gm29609Q3UU56 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Gm29609Q3UU56 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Gm29609Q3UU56 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Gm29609Q3UU56 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Gm29609Q3UU56 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Gm29609Q3UU56 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Gm29609Q3UU56 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Gm29609Q3UU56 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC20.98■□□□□ 0.95
Gm29609Q3UU56 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC20.98■□□□□ 0.95
Gm29609Q3UU56 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Gm29609Q3UU56 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Gm29609Q3UU56 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Gm29609Q3UU56 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Gm29609Q3UU56 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Gm29609Q3UU56 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Gm29609Q3UU56 Gm12669-201ENSMUST00000122162 1009 ntBASIC20.97■□□□□ 0.95
Gm29609Q3UU56 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC20.97■□□□□ 0.95
Gm29609Q3UU56 Gm8493-201ENSMUST00000196881 489 ntBASIC20.97■□□□□ 0.95
Gm29609Q3UU56 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC20.97■□□□□ 0.95
Gm29609Q3UU56 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC20.97■□□□□ 0.95
Gm29609Q3UU56 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Gm29609Q3UU56 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Gm29609Q3UU56 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Gm29609Q3UU56 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Gm29609Q3UU56 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Gm29609Q3UU56 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC20.97■□□□□ 0.95
Gm29609Q3UU56 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Gm29609Q3UU56 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
Gm29609Q3UU56 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Gm29609Q3UU56 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Gm29609Q3UU56 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
Gm29609Q3UU56 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Gm29609Q3UU56 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Gm29609Q3UU56 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Gm29609Q3UU56 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.96■□□□□ 0.95
Gm29609Q3UU56 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Gm29609Q3UU56 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Gm29609Q3UU56 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Gm29609Q3UU56 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Gm29609Q3UU56 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC20.95■□□□□ 0.94
Gm29609Q3UU56 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC20.95■□□□□ 0.94
Gm29609Q3UU56 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Gm29609Q3UU56 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Gm29609Q3UU56 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Gm29609Q3UU56 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Gm29609Q3UU56 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Gm29609Q3UU56 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Gm29609Q3UU56 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Gm29609Q3UU56 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Gm29609Q3UU56 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Gm29609Q3UU56 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Gm29609Q3UU56 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Gm29609Q3UU56 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Gm29609Q3UU56 AC122428.2-201ENSMUST00000216321 1832 ntBASIC20.94■□□□□ 0.94
Gm29609Q3UU56 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Gm29609Q3UU56 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Gm29609Q3UU56 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Gm29609Q3UU56 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Gm29609Q3UU56 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC20.93■□□□□ 0.94
Gm29609Q3UU56 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC20.93■□□□□ 0.94
Gm29609Q3UU56 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Gm29609Q3UU56 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Gm29609Q3UU56 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC20.93■□□□□ 0.94
Gm29609Q3UU56 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Gm29609Q3UU56 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Gm29609Q3UU56 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Gm29609Q3UU56 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.92■□□□□ 0.94
Gm29609Q3UU56 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Gm29609Q3UU56 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Gm29609Q3UU56 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Gm29609Q3UU56 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC20.92■□□□□ 0.94
Gm29609Q3UU56 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Gm29609Q3UU56 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.92■□□□□ 0.94
Gm29609Q3UU56 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
Gm29609Q3UU56 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Gm29609Q3UU56 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC20.91■□□□□ 0.94
Gm29609Q3UU56 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Gm29609Q3UU56 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Gm29609Q3UU56 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Gm29609Q3UU56 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms