Protein–RNA interactions for Protein: Q3UMQ8

Naf1, H/ACA ribonucleoprotein complex non-core subunit NAF1, mousemouse

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Naf1Q3UMQ8 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Naf1Q3UMQ8 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC20.38■□□□□ 0.85
Naf1Q3UMQ8 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Naf1Q3UMQ8 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC20.38■□□□□ 0.85
Naf1Q3UMQ8 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Naf1Q3UMQ8 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Naf1Q3UMQ8 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Naf1Q3UMQ8 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Naf1Q3UMQ8 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Naf1Q3UMQ8 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Naf1Q3UMQ8 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Naf1Q3UMQ8 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Naf1Q3UMQ8 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Naf1Q3UMQ8 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Naf1Q3UMQ8 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Naf1Q3UMQ8 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Naf1Q3UMQ8 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Naf1Q3UMQ8 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Naf1Q3UMQ8 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Naf1Q3UMQ8 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Naf1Q3UMQ8 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Naf1Q3UMQ8 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Naf1Q3UMQ8 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Naf1Q3UMQ8 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
Naf1Q3UMQ8 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC20.36■□□□□ 0.85
Naf1Q3UMQ8 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC20.36■□□□□ 0.85
Naf1Q3UMQ8 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Naf1Q3UMQ8 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Naf1Q3UMQ8 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Naf1Q3UMQ8 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Naf1Q3UMQ8 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Naf1Q3UMQ8 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Naf1Q3UMQ8 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Naf1Q3UMQ8 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Naf1Q3UMQ8 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Naf1Q3UMQ8 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Naf1Q3UMQ8 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Naf1Q3UMQ8 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC20.35■□□□□ 0.85
Naf1Q3UMQ8 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Naf1Q3UMQ8 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Naf1Q3UMQ8 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Naf1Q3UMQ8 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Naf1Q3UMQ8 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC20.35■□□□□ 0.85
Naf1Q3UMQ8 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Naf1Q3UMQ8 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Naf1Q3UMQ8 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Naf1Q3UMQ8 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Naf1Q3UMQ8 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
Naf1Q3UMQ8 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Naf1Q3UMQ8 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Naf1Q3UMQ8 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Naf1Q3UMQ8 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Naf1Q3UMQ8 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Naf1Q3UMQ8 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Naf1Q3UMQ8 Gm18284-201ENSMUST00000172604 624 ntBASIC20.34■□□□□ 0.85
Naf1Q3UMQ8 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Naf1Q3UMQ8 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC20.34■□□□□ 0.85
Naf1Q3UMQ8 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC20.34■□□□□ 0.85
Naf1Q3UMQ8 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.34■□□□□ 0.85
Naf1Q3UMQ8 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Naf1Q3UMQ8 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Naf1Q3UMQ8 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Naf1Q3UMQ8 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Naf1Q3UMQ8 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Naf1Q3UMQ8 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Naf1Q3UMQ8 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
Naf1Q3UMQ8 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
Naf1Q3UMQ8 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Naf1Q3UMQ8 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Naf1Q3UMQ8 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Naf1Q3UMQ8 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Naf1Q3UMQ8 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC20.32■□□□□ 0.84
Naf1Q3UMQ8 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Naf1Q3UMQ8 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Naf1Q3UMQ8 Cdc34b-202ENSMUST00000188741 1252 ntBASIC20.32■□□□□ 0.84
Naf1Q3UMQ8 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Naf1Q3UMQ8 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Naf1Q3UMQ8 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Naf1Q3UMQ8 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Naf1Q3UMQ8 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Naf1Q3UMQ8 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Naf1Q3UMQ8 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Naf1Q3UMQ8 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Naf1Q3UMQ8 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC20.31■□□□□ 0.84
Naf1Q3UMQ8 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Naf1Q3UMQ8 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Naf1Q3UMQ8 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Naf1Q3UMQ8 Gm26833-201ENSMUST00000180899 440 ntBASIC20.31■□□□□ 0.84
Naf1Q3UMQ8 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Naf1Q3UMQ8 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Naf1Q3UMQ8 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Naf1Q3UMQ8 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Naf1Q3UMQ8 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Naf1Q3UMQ8 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Naf1Q3UMQ8 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Naf1Q3UMQ8 Mir6236-201ENSMUST00000184437 123 ntBASIC20.3■□□□□ 0.84
Naf1Q3UMQ8 Gm8495-201ENSMUST00000188740 694 ntBASIC20.3■□□□□ 0.84
Naf1Q3UMQ8 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Naf1Q3UMQ8 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Naf1Q3UMQ8 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms