Protein–RNA interactions for Protein: Q3UMB5

Smcr8, Guanine nucleotide exchange protein SMCR8, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smcr8Q3UMB5 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Smcr8Q3UMB5 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Smcr8Q3UMB5 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
Smcr8Q3UMB5 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Smcr8Q3UMB5 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Smcr8Q3UMB5 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Smcr8Q3UMB5 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
Smcr8Q3UMB5 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC21.5■■□□□ 1.03
Smcr8Q3UMB5 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Smcr8Q3UMB5 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
Smcr8Q3UMB5 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Smcr8Q3UMB5 Gm10209-201ENSMUST00000203397 1607 ntBASIC21.5■■□□□ 1.03
Smcr8Q3UMB5 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Smcr8Q3UMB5 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Smcr8Q3UMB5 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Smcr8Q3UMB5 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Smcr8Q3UMB5 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Smcr8Q3UMB5 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC21.49■■□□□ 1.03
Smcr8Q3UMB5 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Smcr8Q3UMB5 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Smcr8Q3UMB5 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Smcr8Q3UMB5 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Smcr8Q3UMB5 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Smcr8Q3UMB5 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Smcr8Q3UMB5 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Smcr8Q3UMB5 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Smcr8Q3UMB5 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Smcr8Q3UMB5 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC21.48■■□□□ 1.03
Smcr8Q3UMB5 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Smcr8Q3UMB5 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC21.48■■□□□ 1.03
Smcr8Q3UMB5 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC21.48■■□□□ 1.03
Smcr8Q3UMB5 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Smcr8Q3UMB5 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Smcr8Q3UMB5 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
Smcr8Q3UMB5 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Smcr8Q3UMB5 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Smcr8Q3UMB5 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Smcr8Q3UMB5 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Smcr8Q3UMB5 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC21.47■■□□□ 1.03
Smcr8Q3UMB5 Gm26833-201ENSMUST00000180899 440 ntBASIC21.47■■□□□ 1.03
Smcr8Q3UMB5 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC21.47■■□□□ 1.03
Smcr8Q3UMB5 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Smcr8Q3UMB5 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Smcr8Q3UMB5 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Smcr8Q3UMB5 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Smcr8Q3UMB5 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC21.46■■□□□ 1.03
Smcr8Q3UMB5 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC21.46■■□□□ 1.03
Smcr8Q3UMB5 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Smcr8Q3UMB5 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Smcr8Q3UMB5 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
Smcr8Q3UMB5 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Smcr8Q3UMB5 Cdc34b-202ENSMUST00000188741 1252 ntBASIC21.45■■□□□ 1.02
Smcr8Q3UMB5 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Smcr8Q3UMB5 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
Smcr8Q3UMB5 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Smcr8Q3UMB5 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Smcr8Q3UMB5 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
Smcr8Q3UMB5 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Smcr8Q3UMB5 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Smcr8Q3UMB5 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Smcr8Q3UMB5 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Smcr8Q3UMB5 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Smcr8Q3UMB5 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Smcr8Q3UMB5 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
Smcr8Q3UMB5 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Smcr8Q3UMB5 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC21.44■■□□□ 1.02
Smcr8Q3UMB5 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
Smcr8Q3UMB5 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Smcr8Q3UMB5 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Smcr8Q3UMB5 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Smcr8Q3UMB5 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC21.43■■□□□ 1.02
Smcr8Q3UMB5 Slc35b2-207ENSMUST00000226086 850 ntBASIC21.43■■□□□ 1.02
Smcr8Q3UMB5 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Smcr8Q3UMB5 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Smcr8Q3UMB5 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Smcr8Q3UMB5 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Smcr8Q3UMB5 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Smcr8Q3UMB5 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Smcr8Q3UMB5 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC21.43■■□□□ 1.02
Smcr8Q3UMB5 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Smcr8Q3UMB5 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
Smcr8Q3UMB5 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Smcr8Q3UMB5 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
Smcr8Q3UMB5 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Smcr8Q3UMB5 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Smcr8Q3UMB5 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Smcr8Q3UMB5 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC21.42■■□□□ 1.02
Smcr8Q3UMB5 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Smcr8Q3UMB5 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Smcr8Q3UMB5 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Smcr8Q3UMB5 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Smcr8Q3UMB5 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC21.41■■□□□ 1.02
Smcr8Q3UMB5 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Smcr8Q3UMB5 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Smcr8Q3UMB5 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Smcr8Q3UMB5 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
Smcr8Q3UMB5 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Smcr8Q3UMB5 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Smcr8Q3UMB5 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
Smcr8Q3UMB5 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC21.4■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 57.3 ms