Protein–RNA interactions for Protein: Q3KNL4

UPF0728 protein C10orf53 homolog, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3KNL4 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Q3KNL4 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.63■□□□□ 0.73
Q3KNL4 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Q3KNL4 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Q3KNL4 Gm37035-201ENSMUST00000194809 2148 ntBASIC19.63■□□□□ 0.73
Q3KNL4 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC19.63■□□□□ 0.73
Q3KNL4 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Q3KNL4 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Q3KNL4 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Q3KNL4 Dapk1-207ENSMUST00000226059 5009 ntBASIC19.63■□□□□ 0.73
Q3KNL4 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.63■□□□□ 0.73
Q3KNL4 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Q3KNL4 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC19.63■□□□□ 0.73
Q3KNL4 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Q3KNL4 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Q3KNL4 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC19.62■□□□□ 0.73
Q3KNL4 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC19.62■□□□□ 0.73
Q3KNL4 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Q3KNL4 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Q3KNL4 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Q3KNL4 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Q3KNL4 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Q3KNL4 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Q3KNL4 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Q3KNL4 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19.61■□□□□ 0.73
Q3KNL4 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Q3KNL4 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
Q3KNL4 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Q3KNL4 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Q3KNL4 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Q3KNL4 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Q3KNL4 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Q3KNL4 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Q3KNL4 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Q3KNL4 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Q3KNL4 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Q3KNL4 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Q3KNL4 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Q3KNL4 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Q3KNL4 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Q3KNL4 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Q3KNL4 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Q3KNL4 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Q3KNL4 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC19.6■□□□□ 0.73
Q3KNL4 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Q3KNL4 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Q3KNL4 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC19.59■□□□□ 0.73
Q3KNL4 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Q3KNL4 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
Q3KNL4 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Q3KNL4 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC19.59■□□□□ 0.73
Q3KNL4 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Q3KNL4 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC19.59■□□□□ 0.73
Q3KNL4 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Q3KNL4 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Q3KNL4 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Q3KNL4 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Q3KNL4 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Q3KNL4 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Q3KNL4 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Q3KNL4 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Q3KNL4 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
Q3KNL4 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Q3KNL4 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Q3KNL4 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
Q3KNL4 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Q3KNL4 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC19.58■□□□□ 0.73
Q3KNL4 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.73
Q3KNL4 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC19.58■□□□□ 0.72
Q3KNL4 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Q3KNL4 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Q3KNL4 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Q3KNL4 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Q3KNL4 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Q3KNL4 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Q3KNL4 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Q3KNL4 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Q3KNL4 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.57■□□□□ 0.72
Q3KNL4 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Q3KNL4 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC19.57■□□□□ 0.72
Q3KNL4 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Q3KNL4 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC19.57■□□□□ 0.72
Q3KNL4 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Q3KNL4 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC19.56■□□□□ 0.72
Q3KNL4 Gm40881-201ENSMUST00000223397 166 ntBASIC19.56■□□□□ 0.72
Q3KNL4 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19.56■□□□□ 0.72
Q3KNL4 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Q3KNL4 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Q3KNL4 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Q3KNL4 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Q3KNL4 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Q3KNL4 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Q3KNL4 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Q3KNL4 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC19.55■□□□□ 0.72
Q3KNL4 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Q3KNL4 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC19.55■□□□□ 0.72
Q3KNL4 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Q3KNL4 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Q3KNL4 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Q3KNL4 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms