Protein–RNA interactions for Protein: Q30KM9

Defb43, Beta-defensin 43, mousemouse

Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Defb43Q30KM9 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Defb43Q30KM9 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Defb43Q30KM9 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
Defb43Q30KM9 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC18.84■□□□□ 0.61
Defb43Q30KM9 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Defb43Q30KM9 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Defb43Q30KM9 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Defb43Q30KM9 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Defb43Q30KM9 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Defb43Q30KM9 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC18.84■□□□□ 0.61
Defb43Q30KM9 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Defb43Q30KM9 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Defb43Q30KM9 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Defb43Q30KM9 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Defb43Q30KM9 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Defb43Q30KM9 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Defb43Q30KM9 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Defb43Q30KM9 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Defb43Q30KM9 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Defb43Q30KM9 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Defb43Q30KM9 Gm21956-201ENSMUST00000179946 522 ntBASIC18.83■□□□□ 0.6
Defb43Q30KM9 Mir6236-201ENSMUST00000184437 123 ntBASIC18.83■□□□□ 0.6
Defb43Q30KM9 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC18.83■□□□□ 0.6
Defb43Q30KM9 Gm9207-201ENSMUST00000198773 1115 ntBASIC18.83■□□□□ 0.6
Defb43Q30KM9 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC18.83■□□□□ 0.6
Defb43Q30KM9 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Defb43Q30KM9 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Defb43Q30KM9 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Defb43Q30KM9 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Defb43Q30KM9 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Defb43Q30KM9 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Defb43Q30KM9 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Defb43Q30KM9 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Defb43Q30KM9 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Defb43Q30KM9 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Defb43Q30KM9 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Defb43Q30KM9 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Defb43Q30KM9 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Defb43Q30KM9 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Defb43Q30KM9 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Defb43Q30KM9 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Defb43Q30KM9 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Defb43Q30KM9 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Defb43Q30KM9 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Defb43Q30KM9 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Defb43Q30KM9 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Defb43Q30KM9 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Defb43Q30KM9 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC18.81■□□□□ 0.6
Defb43Q30KM9 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Defb43Q30KM9 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Defb43Q30KM9 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Defb43Q30KM9 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Defb43Q30KM9 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
Defb43Q30KM9 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Defb43Q30KM9 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Defb43Q30KM9 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
Defb43Q30KM9 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Defb43Q30KM9 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
Defb43Q30KM9 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC18.8■□□□□ 0.6
Defb43Q30KM9 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Defb43Q30KM9 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Defb43Q30KM9 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Defb43Q30KM9 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Defb43Q30KM9 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Defb43Q30KM9 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
Defb43Q30KM9 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Defb43Q30KM9 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC18.8■□□□□ 0.6
Defb43Q30KM9 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Defb43Q30KM9 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Defb43Q30KM9 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC18.79■□□□□ 0.6
Defb43Q30KM9 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Defb43Q30KM9 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Defb43Q30KM9 Gm43759-201ENSMUST00000196925 1261 ntBASIC18.79■□□□□ 0.6
Defb43Q30KM9 Gm13241-201ENSMUST00000094493 780 ntBASIC18.79■□□□□ 0.6
Defb43Q30KM9 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Defb43Q30KM9 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Defb43Q30KM9 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Defb43Q30KM9 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Defb43Q30KM9 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Defb43Q30KM9 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Defb43Q30KM9 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Defb43Q30KM9 AC140930.3-201ENSMUST00000222935 274 ntBASIC18.78■□□□□ 0.6
Defb43Q30KM9 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC18.78■□□□□ 0.6
Defb43Q30KM9 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Defb43Q30KM9 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Defb43Q30KM9 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Defb43Q30KM9 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Defb43Q30KM9 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Defb43Q30KM9 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Defb43Q30KM9 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC18.77■□□□□ 0.6
Defb43Q30KM9 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC18.77■□□□□ 0.6
Defb43Q30KM9 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Defb43Q30KM9 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Defb43Q30KM9 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Defb43Q30KM9 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Defb43Q30KM9 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC18.77■□□□□ 0.6
Defb43Q30KM9 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Defb43Q30KM9 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Defb43Q30KM9 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
Defb43Q30KM9 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms