Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC19.95■□□□□ 0.78
Col9a1Q05722 AC153881.2-201ENSMUST00000214877 204 ntBASIC19.95■□□□□ 0.78
Col9a1Q05722 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Col9a1Q05722 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Col9a1Q05722 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Col9a1Q05722 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Col9a1Q05722 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC19.94■□□□□ 0.78
Col9a1Q05722 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
Col9a1Q05722 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC19.94■□□□□ 0.78
Col9a1Q05722 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Col9a1Q05722 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Col9a1Q05722 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Col9a1Q05722 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Col9a1Q05722 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Col9a1Q05722 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Col9a1Q05722 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC19.93■□□□□ 0.78
Col9a1Q05722 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Col9a1Q05722 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Col9a1Q05722 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Col9a1Q05722 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC19.93■□□□□ 0.78
Col9a1Q05722 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Col9a1Q05722 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Col9a1Q05722 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC19.93■□□□□ 0.78
Col9a1Q05722 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Col9a1Q05722 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Col9a1Q05722 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Col9a1Q05722 AC158990.1-201ENSMUST00000221450 2016 ntBASIC19.92■□□□□ 0.78
Col9a1Q05722 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Col9a1Q05722 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Col9a1Q05722 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC19.92■□□□□ 0.78
Col9a1Q05722 Gm37055-201ENSMUST00000191866 133 ntBASIC19.92■□□□□ 0.78
Col9a1Q05722 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Col9a1Q05722 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Col9a1Q05722 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC19.92■□□□□ 0.78
Col9a1Q05722 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Col9a1Q05722 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Col9a1Q05722 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Col9a1Q05722 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Col9a1Q05722 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Col9a1Q05722 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Col9a1Q05722 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Col9a1Q05722 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Col9a1Q05722 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Col9a1Q05722 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Col9a1Q05722 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC19.91■□□□□ 0.78
Col9a1Q05722 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Col9a1Q05722 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Col9a1Q05722 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Col9a1Q05722 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Col9a1Q05722 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Col9a1Q05722 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Col9a1Q05722 AC137127.1-201ENSMUST00000213466 1078 ntBASIC19.9■□□□□ 0.78
Col9a1Q05722 Gm5867-201ENSMUST00000063197 592 ntBASIC19.9■□□□□ 0.78
Col9a1Q05722 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Col9a1Q05722 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Col9a1Q05722 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Col9a1Q05722 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC19.89■□□□□ 0.77
Col9a1Q05722 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC19.89■□□□□ 0.77
Col9a1Q05722 Gm10231-201ENSMUST00000181584 441 ntBASIC19.89■□□□□ 0.77
Col9a1Q05722 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Col9a1Q05722 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Col9a1Q05722 Gm10175-202ENSMUST00000208752 441 ntBASIC19.89■□□□□ 0.77
Col9a1Q05722 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Col9a1Q05722 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Col9a1Q05722 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Col9a1Q05722 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Col9a1Q05722 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC19.88■□□□□ 0.77
Col9a1Q05722 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Col9a1Q05722 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Col9a1Q05722 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC19.87■□□□□ 0.77
Col9a1Q05722 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Col9a1Q05722 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Col9a1Q05722 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Col9a1Q05722 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Col9a1Q05722 Gm4430-201ENSMUST00000192413 1943 ntBASIC19.86■□□□□ 0.77
Col9a1Q05722 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Col9a1Q05722 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Col9a1Q05722 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC19.86■□□□□ 0.77
Col9a1Q05722 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC19.86■□□□□ 0.77
Col9a1Q05722 Gm43530-201ENSMUST00000195920 274 ntBASIC19.86■□□□□ 0.77
Col9a1Q05722 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Col9a1Q05722 AC122769.4-201ENSMUST00000228166 901 ntBASIC19.86■□□□□ 0.77
Col9a1Q05722 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Col9a1Q05722 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Col9a1Q05722 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC19.85■□□□□ 0.77
Col9a1Q05722 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Col9a1Q05722 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC19.85■□□□□ 0.77
Col9a1Q05722 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
Col9a1Q05722 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Col9a1Q05722 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Col9a1Q05722 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Col9a1Q05722 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Col9a1Q05722 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Col9a1Q05722 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Col9a1Q05722 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Col9a1Q05722 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Col9a1Q05722 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Col9a1Q05722 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Col9a1Q05722 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Col9a1Q05722 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms