Protein–RNA interactions for Protein: P82347

Sgcd, Delta-sarcoglycan, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcdP82347 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SgcdP82347 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SgcdP82347 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SgcdP82347 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC18.4■□□□□ 0.54
SgcdP82347 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
SgcdP82347 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SgcdP82347 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
SgcdP82347 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SgcdP82347 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SgcdP82347 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SgcdP82347 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SgcdP82347 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC18.4■□□□□ 0.54
SgcdP82347 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SgcdP82347 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SgcdP82347 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC18.4■□□□□ 0.54
SgcdP82347 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SgcdP82347 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SgcdP82347 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SgcdP82347 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SgcdP82347 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
SgcdP82347 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SgcdP82347 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC18.39■□□□□ 0.53
SgcdP82347 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SgcdP82347 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
SgcdP82347 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
SgcdP82347 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SgcdP82347 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC18.39■□□□□ 0.53
SgcdP82347 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SgcdP82347 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SgcdP82347 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SgcdP82347 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
SgcdP82347 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SgcdP82347 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SgcdP82347 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SgcdP82347 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
SgcdP82347 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SgcdP82347 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SgcdP82347 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SgcdP82347 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
SgcdP82347 Gm18755-201ENSMUST00000218030 1099 ntBASIC18.38■□□□□ 0.53
SgcdP82347 Gm9959-201ENSMUST00000068277 390 ntBASIC18.38■□□□□ 0.53
SgcdP82347 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SgcdP82347 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SgcdP82347 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SgcdP82347 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SgcdP82347 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SgcdP82347 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SgcdP82347 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SgcdP82347 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC18.37■□□□□ 0.53
SgcdP82347 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC18.37■□□□□ 0.53
SgcdP82347 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SgcdP82347 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SgcdP82347 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SgcdP82347 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SgcdP82347 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SgcdP82347 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SgcdP82347 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SgcdP82347 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SgcdP82347 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
SgcdP82347 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
SgcdP82347 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SgcdP82347 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
SgcdP82347 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SgcdP82347 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC18.36■□□□□ 0.53
SgcdP82347 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SgcdP82347 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SgcdP82347 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SgcdP82347 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SgcdP82347 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
SgcdP82347 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SgcdP82347 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SgcdP82347 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SgcdP82347 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SgcdP82347 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SgcdP82347 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC18.35■□□□□ 0.53
SgcdP82347 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC18.35■□□□□ 0.53
SgcdP82347 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC18.35■□□□□ 0.53
SgcdP82347 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SgcdP82347 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC18.35■□□□□ 0.53
SgcdP82347 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SgcdP82347 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.34■□□□□ 0.53
SgcdP82347 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
SgcdP82347 Nsd1-206ENSMUST00000224918 1001 ntBASIC18.34■□□□□ 0.53
SgcdP82347 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SgcdP82347 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SgcdP82347 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SgcdP82347 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SgcdP82347 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.33■□□□□ 0.53
SgcdP82347 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SgcdP82347 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SgcdP82347 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.33■□□□□ 0.53
SgcdP82347 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SgcdP82347 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SgcdP82347 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC18.33■□□□□ 0.52
SgcdP82347 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SgcdP82347 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SgcdP82347 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SgcdP82347 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
SgcdP82347 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SgcdP82347 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms