Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rpl39P62892 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
Rpl39P62892 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rpl39P62892 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Rpl39P62892 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Rpl39P62892 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Rpl39P62892 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Rpl39P62892 Gm27502-201ENSMUST00000183495 199 ntBASIC14.23□□□□□ -0.13
Rpl39P62892 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rpl39P62892 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC14.23□□□□□ -0.13
Rpl39P62892 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rpl39P62892 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rpl39P62892 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Rpl39P62892 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rpl39P62892 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rpl39P62892 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rpl39P62892 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC14.23□□□□□ -0.13
Rpl39P62892 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rpl39P62892 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rpl39P62892 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rpl39P62892 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rpl39P62892 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rpl39P62892 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rpl39P62892 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rpl39P62892 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rpl39P62892 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rpl39P62892 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rpl39P62892 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rpl39P62892 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rpl39P62892 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rpl39P62892 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC14.22□□□□□ -0.13
Rpl39P62892 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rpl39P62892 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rpl39P62892 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC14.21□□□□□ -0.13
Rpl39P62892 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rpl39P62892 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rpl39P62892 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rpl39P62892 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rpl39P62892 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rpl39P62892 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rpl39P62892 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rpl39P62892 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rpl39P62892 Gm11847-201ENSMUST00000125165 1119 ntBASIC14.21□□□□□ -0.13
Rpl39P62892 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Rpl39P62892 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC14.21□□□□□ -0.13
Rpl39P62892 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC14.21□□□□□ -0.13
Rpl39P62892 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.13
Rpl39P62892 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rpl39P62892 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Rpl39P62892 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Rpl39P62892 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC14.21□□□□□ -0.14
Rpl39P62892 Gm8093-201ENSMUST00000128935 1892 ntBASIC14.21□□□□□ -0.14
Rpl39P62892 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rpl39P62892 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Rpl39P62892 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rpl39P62892 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rpl39P62892 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Rpl39P62892 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rpl39P62892 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC14.2□□□□□ -0.14
Rpl39P62892 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rpl39P62892 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Rpl39P62892 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rpl39P62892 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC14.2□□□□□ -0.14
Rpl39P62892 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Rpl39P62892 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rpl39P62892 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC14.2□□□□□ -0.14
Rpl39P62892 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC14.19□□□□□ -0.14
Rpl39P62892 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rpl39P62892 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rpl39P62892 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rpl39P62892 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rpl39P62892 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rpl39P62892 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rpl39P62892 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rpl39P62892 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rpl39P62892 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rpl39P62892 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rpl39P62892 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rpl39P62892 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rpl39P62892 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rpl39P62892 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rpl39P62892 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rpl39P62892 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rpl39P62892 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rpl39P62892 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Rpl39P62892 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rpl39P62892 Dapk1-207ENSMUST00000226059 5009 ntBASIC14.18□□□□□ -0.14
Rpl39P62892 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rpl39P62892 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rpl39P62892 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rpl39P62892 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Rpl39P62892 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rpl39P62892 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Rpl39P62892 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rpl39P62892 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC14.18□□□□□ -0.14
Rpl39P62892 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Rpl39P62892 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rpl39P62892 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rpl39P62892 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rpl39P62892 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 13.1 ms